4ete

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 6 November 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4ete.jpg|left|200px]]
 
-
<!--
+
==Lysozyme, room-temperature, rotating anode, 0.0021 MGy==
-
The line below this paragraph, containing "STRUCTURE_4ete", creates the "Structure Box" on the page.
+
<StructureSection load='4ete' size='340' side='right'caption='[[4ete]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4ete]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ETE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ETE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.905&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
{{STRUCTURE_4ete| PDB=4ete | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ete FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ete OCA], [https://pdbe.org/4ete PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ete RCSB], [https://www.ebi.ac.uk/pdbsum/4ete PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ete ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Structure determination of proteins and other macromolecules has historically required the growth of high-quality crystals sufficiently large to diffract x-rays efficiently while withstanding radiation damage. We applied serial femtosecond crystallography (SFX) using an x-ray free-electron laser (XFEL) to obtain high-resolution structural information from microcrystals (&lt;1x1x3 mum(3)) of the well-characterized model protein lysozyme. The agreement with synchrotron data demonstrates the immediate relevance of SFX for analyzing the structure of the large group of difficult-to-crystallize molecules.
-
===Lysozyme, room-temperature, rotating anode, 0.0021 MGy===
+
High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography.,Boutet S, Lomb L, Williams GJ, Barends TR, Aquila A, Doak RB, Weierstall U, Deponte DP, Steinbrener J, Shoeman RL, Messerschmidt M, Barty A, White TA, Kassemeyer S, Kirian RA, Seibert MM, Montanez PA, Kenney C, Herbst R, Hart P, Pines J, Haller G, Gruner SM, Philipp HT, Tate MW, Hromalik M, Koerner LJ, van Bakel N, Morse J, Ghonsalves W, Arnlund D, Bogan MJ, Caleman C, Fromme R, Hampton CY, Hunter MS, Johansson L, Katona G, Kupitz C, Liang M, Martin AV, Nass K, Redecke L, Stellato F, Timneanu N, Wang D, Zatsepin NA, Schafer D, Defever J, Neutze R, Fromme P, Spence JC, Chapman HN, Schlichting I Science. 2012 May 31. PMID:22653729<ref>PMID:22653729</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 4ete" style="background-color:#fffaf0;"></div>
-
<!--
+
==See Also==
-
The line below this paragraph, {{ABSTRACT_PUBMED_22653729}}, adds the Publication Abstract to the page
+
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 22653729 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_22653729}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[4ete]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ETE OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022653729</ref><references group="xtra"/>
+
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Aquila, A.]]
+
[[Category: Aquila A]]
-
[[Category: Arnlund, D.]]
+
[[Category: Arnlund D]]
-
[[Category: Bakel, N van.]]
+
[[Category: Barends T]]
-
[[Category: Barends, T.]]
+
[[Category: Barty A]]
-
[[Category: Barty, A.]]
+
[[Category: Bogan M]]
-
[[Category: Bogan, M.]]
+
[[Category: Boutet S]]
-
[[Category: Boutet, S.]]
+
[[Category: Calemann C]]
-
[[Category: Calemann, C.]]
+
[[Category: Chapman H]]
-
[[Category: Chapman, H.]]
+
[[Category: DePonte D]]
-
[[Category: DePonte, D.]]
+
[[Category: Defever K]]
-
[[Category: Defever, K.]]
+
[[Category: Doak RB]]
-
[[Category: Doak, R B.]]
+
[[Category: Fromme P]]
-
[[Category: Fromme, P.]]
+
[[Category: Fromme R]]
-
[[Category: Fromme, R.]]
+
[[Category: Ghonsalves W]]
-
[[Category: Ghonsalves, W.]]
+
[[Category: Gruner S]]
-
[[Category: Gruner, S.]]
+
[[Category: Haller G]]
-
[[Category: Haller, G.]]
+
[[Category: Hampton C]]
-
[[Category: Hampton, C.]]
+
[[Category: Hart P]]
-
[[Category: Hart, P.]]
+
[[Category: Herbst R]]
-
[[Category: Herbst, R.]]
+
[[Category: Hromalik M]]
-
[[Category: Hromalik, M.]]
+
[[Category: Hunter M]]
-
[[Category: Hunter, M.]]
+
[[Category: Johansson L]]
-
[[Category: Johansson, L.]]
+
[[Category: Kassemeyer S]]
-
[[Category: Kassemeyer, S.]]
+
[[Category: Katona G]]
-
[[Category: Katona, G.]]
+
[[Category: Kenney C]]
-
[[Category: Kenney, C.]]
+
[[Category: Kirian R]]
-
[[Category: Kirian, R.]]
+
[[Category: Koerner L]]
-
[[Category: Koerner, L.]]
+
[[Category: Kupitz C]]
-
[[Category: Kupitz, C.]]
+
[[Category: Liang M]]
-
[[Category: Liang, M.]]
+
[[Category: Lomb L]]
-
[[Category: Lomb, L.]]
+
[[Category: Martin A]]
-
[[Category: Martin, A.]]
+
[[Category: Messerschmidt M]]
-
[[Category: Messerschmidt, M.]]
+
[[Category: Montanez P]]
-
[[Category: Montanez, P.]]
+
[[Category: Morse J]]
-
[[Category: Morse, J.]]
+
[[Category: Nass K]]
-
[[Category: Nass, K.]]
+
[[Category: Neutze R]]
-
[[Category: Neutze, R.]]
+
[[Category: Philllip H]]
-
[[Category: Philllip, H.]]
+
[[Category: Pines J]]
-
[[Category: Pines, J.]]
+
[[Category: Redecke L]]
-
[[Category: Redecke, L.]]
+
[[Category: Schafer D]]
-
[[Category: Schafer, D.]]
+
[[Category: Schlichting I]]
-
[[Category: Schlichting, I.]]
+
[[Category: Seibert M]]
-
[[Category: Seibert, M.]]
+
[[Category: Shoeman R]]
-
[[Category: Shoeman, R.]]
+
[[Category: Spence J]]
-
[[Category: Spence, J.]]
+
[[Category: Steinbrener J]]
-
[[Category: Steinbrener, J.]]
+
[[Category: Stellato F]]
-
[[Category: Stellato, F.]]
+
[[Category: Tate M]]
-
[[Category: Tate, M.]]
+
[[Category: Timneanu N]]
-
[[Category: Timneanu, N.]]
+
[[Category: Wang D]]
-
[[Category: Wang, D.]]
+
[[Category: Weierstall U]]
-
[[Category: Weierstall, U.]]
+
[[Category: White T]]
-
[[Category: White, T.]]
+
[[Category: Williams G]]
-
[[Category: Williams, G.]]
+
[[Category: Zatsepin N]]
-
[[Category: Zatsepin, N.]]
+
[[Category: Van Bakel N]]
-
[[Category: Hydrolase]]
+
-
[[Category: Lysozyme]]
+

Current revision

Lysozyme, room-temperature, rotating anode, 0.0021 MGy

PDB ID 4ete

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools