1fep
From Proteopedia
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- | [[Image:1fep.png|left|200px]] | ||
- | < | + | ==FERRIC ENTEROBACTIN RECEPTOR== |
- | + | <StructureSection load='1fep' size='340' side='right'caption='[[1fep]], [[Resolution|resolution]] 2.40Å' scene=''> | |
- | You may | + | == Structural highlights == |
- | + | <table><tr><td colspan='2'>[[1fep]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FEP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FEP FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |
- | - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fep OCA], [https://pdbe.org/1fep PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fep RCSB], [https://www.ebi.ac.uk/pdbsum/1fep PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fep ProSAT]</span></td></tr> | |
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/FEPA_ECOLI FEPA_ECOLI] This protein is involved in the initial step of iron uptake by binding ferrienterobactin (Fe-ENT), an iron chelatin siderophore that allows E.coli to extract iron from the environment. FepA also acts as a receptor for colicins B and D. | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/1fep_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fep ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Integral outer membrane receptors for iron chelates and vitamin B12 carry out specific ligand transport against a concentration gradient. Energy for active transport is obtained from the proton-motive force of the inner membrane through physical interaction with TonB-ExbB-ExbD, an inner membrane complex. Here we report the crystal structure of an active transport, outer membrane receptor at 2.4 A resolution. Two distinct functional domains are revealed: (i) a 22-stranded beta-barrel that spans the outer membrane and contains large extracellular loops which appear to function in ligand binding; and (ii) a globular N-terminal domain that folds into the barrel pore, inhibiting access to the periplasm and contributing two additional loops for potential ligand binding. These loops could provide a signaling pathway between the processes of ligand recognition and TonB-mediated transport. The blockage of the pore suggests that the N-terminal domain must undergo a conformational rearrangement to allow ligand transport into the periplasm. | ||
- | + | Crystal structure of the outer membrane active transporter FepA from Escherichia coli.,Buchanan SK, Smith BS, Venkatramani L, Xia D, Esser L, Palnitkar M, Chakraborty R, van der Helm D, Deisenhofer J Nat Struct Biol. 1999 Jan;6(1):56-63. PMID:9886293<ref>PMID:9886293</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 1fep" style="background-color:#fffaf0;"></div> | |
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- | == | + | |
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==See Also== | ==See Also== | ||
*[[Ferric enterobactin receptor|Ferric enterobactin receptor]] | *[[Ferric enterobactin receptor|Ferric enterobactin receptor]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
- | [[Category: Escherichia coli | + | </StructureSection> |
- | [[Category: Buchanan | + | [[Category: Escherichia coli K-12]] |
- | [[Category: Chakraborty | + | [[Category: Large Structures]] |
- | [[Category: Deisenhofer | + | [[Category: Buchanan SK]] |
- | [[Category: Esser | + | [[Category: Chakraborty R]] |
- | [[Category: | + | [[Category: Deisenhofer J]] |
- | [[Category: | + | [[Category: Esser L]] |
- | [[Category: | + | [[Category: Palnitkar M]] |
- | [[Category: Ventatramani | + | [[Category: Smith BS]] |
- | [[Category: Xia | + | [[Category: Van Der Helm D]] |
- | + | [[Category: Ventatramani L]] | |
- | + | [[Category: Xia D]] | |
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Current revision
FERRIC ENTEROBACTIN RECEPTOR
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