1mkf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:15, 21 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1mkf.png|left|200px]]
 
-
<!--
+
==VIRAL CHEMOKINE BINDING PROTEIN M3 FROM MURINE GAMMAHERPESVIRUS 68==
-
The line below this paragraph, containing "STRUCTURE_1mkf", creates the "Structure Box" on the page.
+
<StructureSection load='1mkf' size='340' side='right'caption='[[1mkf]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1mkf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Murid_gammaherpesvirus_4 Murid gammaherpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MKF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mkf OCA], [https://pdbe.org/1mkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mkf RCSB], [https://www.ebi.ac.uk/pdbsum/1mkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mkf ProSAT], [https://www.topsan.org/Proteins/MCSG/1mkf TOPSAN]</span></td></tr>
-
{{STRUCTURE_1mkf| PDB=1mkf | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O41925_MHV68 O41925_MHV68]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The M3 protein encoded by murine gamma herpesvirus68 (gamma HV68) functions as an immune system saboteur by the engagement of chemoattractant cytokines, thereby altering host antiviral inflammatory responses. Here we report the crystal structures of M3 both alone and in complex with the CC chemokine MCP-1. M3 is a two-domain beta sandwich protein with a unique sequence and topology, forming a tightly packed anti-parallel dimer. The stoichiometry of the MCP-1:M3 complex is 2:2, with two monomeric chemokines embedded at distal ends of the preassociated M3 dimer. Conformational flexibility and electrostatic complementation are both used by M3 to achieve high-affinity and broad-spectrum chemokine engagement. M3 also employs structural mimicry to promiscuously sequester chemokines, engaging conservative structural elements associated with both chemokine homodimerization and binding to G protein-coupled receptors.
-
===VIRAL CHEMOKINE BINDING PROTEIN M3 FROM MURINE GAMMAHERPESVIRUS 68===
+
Structural basis of chemokine sequestration by a herpesvirus decoy receptor.,Alexander JM, Nelson CA, van Berkel V, Lau EK, Studts JM, Brett TJ, Speck SH, Handel TM, Virgin HW, Fremont DH Cell. 2002 Nov 1;111(3):343-56. PMID:12419245<ref>PMID:12419245</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12419245}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 1mkf" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12419245 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_12419245}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[1mkf]] is a 2 chain structure of [[Viral chemokine binding protein M3]] with sequence from [http://en.wikipedia.org/wiki/Murid_herpesvirus_4 Murid herpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MKF OCA].
+
[[Category: Murid gammaherpesvirus 4]]
-
 
+
[[Category: Alexander JM]]
-
==See Also==
+
[[Category: Fremont DH]]
-
*[[Viral chemokine binding protein M3|Viral chemokine binding protein M3]]
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:012419245</ref><references group="xtra"/>
+
-
[[Category: Murid herpesvirus 4]]
+
-
[[Category: Alexander, J M.]]
+
-
[[Category: Fremont, D H.]]
+
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
-
[[Category: Chemokine binding protein]]
+
-
[[Category: Decoy receptor]]
+
-
[[Category: Herpesvirus]]
+
-
[[Category: Immune system]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Viral immune evasion]]
+

Current revision

VIRAL CHEMOKINE BINDING PROTEIN M3 FROM MURINE GAMMAHERPESVIRUS 68

PDB ID 1mkf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools