3gfy

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[[Image:3gfy.png|left|200px]]
 
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==Klebsiella pneumoniae BlrP1 with FMN and cyclic diGMP, no metal ions==
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The line below this paragraph, containing "STRUCTURE_3gfy", creates the "Structure Box" on the page.
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<StructureSection load='3gfy' size='340' side='right'caption='[[3gfy]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gfy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 Klebsiella pneumoniae subsp. pneumoniae MGH 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GFY FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
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{{STRUCTURE_3gfy| PDB=3gfy | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gfy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfy OCA], [https://pdbe.org/3gfy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gfy RCSB], [https://www.ebi.ac.uk/pdbsum/3gfy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gfy ProSAT]</span></td></tr>
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</table>
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===Klebsiella pneumoniae BlrP1 with FMN and cyclic diGMP, no metal ions===
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== Function ==
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[https://www.uniprot.org/uniprot/A6T8V8_KLEP7 A6T8V8_KLEP7]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 019536266 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfy_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_019536266}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[3gfy]] is a 2 chain structure of [[C-di-GMP specific phosphodiesterases]] with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFY OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gfy ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[C-di-GMP specific phosphodiesterases|C-di-GMP specific phosphodiesterases]]
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*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:019536266</ref><references group="xtra"/>
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[[Category: Klebsiella pneumoniae subsp. pneumoniae MGH 78578]]
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[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]]
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[[Category: Large Structures]]
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[[Category: Barends, T.]]
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[[Category: Barends T]]
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[[Category: Beitlich, T.]]
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[[Category: Beitlich T]]
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[[Category: Gomelsky, M.]]
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[[Category: Gomelsky M]]
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[[Category: Griese, J.]]
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[[Category: Griese J]]
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[[Category: Hartmann, E.]]
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[[Category: Hartmann E]]
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[[Category: Kirienko, N.]]
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[[Category: Kirienko N]]
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[[Category: Reinstein, J.]]
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[[Category: Reinstein J]]
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[[Category: Ryjenkov, D.]]
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[[Category: Ryjenkov D]]
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[[Category: Schlichting, I.]]
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[[Category: Schlichting I]]
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[[Category: Shoeman, R.]]
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[[Category: Shoeman R]]
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[[Category: Bluf domain]]
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[[Category: Eal domain]]
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[[Category: Hydrolase]]
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[[Category: Signaling protein]]
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[[Category: Tim-barrel]]
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Current revision

Klebsiella pneumoniae BlrP1 with FMN and cyclic diGMP, no metal ions

PDB ID 3gfy

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