4enm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:05, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4enm.jpg|left|200px]]
 
-
{{STRUCTURE_4enm| PDB=4enm | SCENE= }}
+
==Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-benzylguanine==
-
 
+
<StructureSection load='4enm' size='340' side='right'caption='[[4enm]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
-
===Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-benzylguanine===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4enm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe_972h- Schizosaccharomyces pombe 972h-] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ENM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ENM FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22658721}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8402&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BZG:6-(BENZYLOXY)-9-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-9H-PURIN-2-AMINE'>BZG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4enm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4enm OCA], [https://pdbe.org/4enm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4enm RCSB], [https://www.ebi.ac.uk/pdbsum/4enm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4enm ProSAT]</span></td></tr>
-
[[4enm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ENM OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/ATL1_SCHPO ATL1_SCHPO] Acts as a DNA damage recognition factor. Required for DNA repair from mutagenic O(6)-alkylguanine adducts. Binds O(6)-alkylguanine lesions providing a signal for other DNA repair pathways.
-
<ref group="xtra">PMID:022658721</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Schizosaccharomyces pombe]]
+
</StructureSection>
-
[[Category: Arvai, A S.]]
+
[[Category: Large Structures]]
-
[[Category: Tainer, J A.]]
+
[[Category: Schizosaccharomyces pombe 972h-]]
-
[[Category: Tubbs, J L.]]
+
[[Category: Synthetic construct]]
-
[[Category: Alkylation]]
+
[[Category: Arvai AS]]
-
[[Category: Alkyltransferase]]
+
[[Category: Tainer JA]]
-
[[Category: Base repair]]
+
[[Category: Tubbs JL]]
-
[[Category: Dna]]
+
-
[[Category: Dna binding protein-dna complex]]
+
-
[[Category: Dna damage]]
+
-
[[Category: Dna repair]]
+
-
[[Category: Guanine]]
+
-
[[Category: Ner]]
+
-
[[Category: Nucleotide excision repair]]
+

Current revision

Crystal structure of S. pombe Atl1 in complex with damaged DNA containing O6-benzylguanine

PDB ID 4enm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools