This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3mse
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3mse.png|left|200px]] | ||
| - | + | ==Crystal structure of C-terminal domain of PF110239.== | |
| - | + | <StructureSection load='3mse' size='340' side='right'caption='[[3mse]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3mse]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MSE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MSE FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [[3mse]] is a 1 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mse FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mse OCA], [https://pdbe.org/3mse PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mse RCSB], [https://www.ebi.ac.uk/pdbsum/3mse PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mse ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8IID5_PLAF7 Q8IID5_PLAF7] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ms/3mse_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mse ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Plasmodium falciparum]] | [[Category: Plasmodium falciparum]] | ||
| - | [[Category: Amani | + | [[Category: Amani M]] |
| - | [[Category: Arrowsmith | + | [[Category: Arrowsmith CH]] |
| - | [[Category: Artz | + | [[Category: Artz JD]] |
| - | [[Category: Bochkarev | + | [[Category: Bochkarev A]] |
| - | [[Category: Bountra | + | [[Category: Bountra C]] |
| - | [[Category: Edwards | + | [[Category: Edwards AM]] |
| - | [[Category: Hui | + | [[Category: Hui R]] |
| - | [[Category: Hutchinson | + | [[Category: Hutchinson A]] |
| - | [[Category: Lin | + | [[Category: Lin YH]] |
| - | [[Category: Neculai | + | [[Category: Neculai AM]] |
| - | + | [[Category: Sullivan H]] | |
| - | [[Category: Sullivan | + | [[Category: Tempel W]] |
| - | [[Category: Tempel | + | [[Category: Weadge J]] |
| - | [[Category: Weadge | + | [[Category: Weigelt J]] |
| - | [[Category: Weigelt | + | [[Category: Wernimont AK]] |
| - | [[Category: Wernimont | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of C-terminal domain of PF110239.
| |||||||||||
Categories: Large Structures | Plasmodium falciparum | Amani M | Arrowsmith CH | Artz JD | Bochkarev A | Bountra C | Edwards AM | Hui R | Hutchinson A | Lin YH | Neculai AM | Sullivan H | Tempel W | Weadge J | Weigelt J | Wernimont AK

