This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3nie
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3nie.png|left|200px]] | ||
| - | + | ==Crystal Structure of PF11_0147== | |
| - | + | <StructureSection load='3nie' size='340' side='right'caption='[[3nie]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3nie]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NIE FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene></td></tr> |
| - | [[3nie]] is a 2 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nie FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nie OCA], [https://pdbe.org/3nie PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nie RCSB], [https://www.ebi.ac.uk/pdbsum/3nie PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nie ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q7KQK7_PLAF7 Q7KQK7_PLAF7] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/3nie_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nie ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Plasmodium falciparum]] | [[Category: Plasmodium falciparum]] | ||
| - | [[Category: Amani | + | [[Category: Amani M]] |
| - | [[Category: Arrowsmith | + | [[Category: Arrowsmith CH]] |
| - | [[Category: Artz | + | [[Category: Artz JD]] |
| - | [[Category: Bochkarev | + | [[Category: Bochkarev A]] |
| - | [[Category: Bountra | + | [[Category: Bountra C]] |
| - | [[Category: Chau | + | [[Category: Chau I]] |
| - | [[Category: Cossar | + | [[Category: Cossar D]] |
| - | [[Category: Edwards | + | [[Category: Edwards AM]] |
| - | [[Category: Hills | + | [[Category: Hills T]] |
| - | [[Category: Hui | + | [[Category: Hui R]] |
| - | [[Category: Hutchinson | + | [[Category: Hutchinson A]] |
| - | [[Category: Kozieradzki | + | [[Category: Kozieradzki I]] |
| - | [[Category: Lew | + | [[Category: Lew J]] |
| - | [[Category: MacKenzie | + | [[Category: MacKenzie F]] |
| - | [[Category: Senisterra | + | [[Category: Senisterra G]] |
| - | [[Category: Sullivan | + | [[Category: Sullivan H]] |
| - | [[Category: Weigelt | + | [[Category: Weigelt J]] |
| - | [[Category: Wernimont | + | [[Category: Wernimont AK]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of PF11_0147
| |||||||||||
Categories: Large Structures | Plasmodium falciparum | Amani M | Arrowsmith CH | Artz JD | Bochkarev A | Bountra C | Chau I | Cossar D | Edwards AM | Hills T | Hui R | Hutchinson A | Kozieradzki I | Lew J | MacKenzie F | Senisterra G | Sullivan H | Weigelt J | Wernimont AK
