This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1h0i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:26, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1h0i.png|left|200px]]
 
-
{{STRUCTURE_1h0i| PDB=1h0i | SCENE= }}
+
==Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium==
-
 
+
<StructureSection load='1h0i' size='340' side='right'caption='[[1h0i]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1h0i]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Gliocladium Gliocladium] and [https://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H0I FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12093900}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IAS:BETA-L-ASPARTIC+ACID'>IAS</scene>, <scene name='pdbligand=MEA:N-METHYLPHENYLALANINE'>MEA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=VR0:N~5~-[N-(METHYLCARBAMOYL)CARBAMIMIDOYL]-L-ORNITHINE'>VR0</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h0i OCA], [https://pdbe.org/1h0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h0i RCSB], [https://www.ebi.ac.uk/pdbsum/1h0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h0i ProSAT]</span></td></tr>
-
[[1h0i]] is a 4 chain structure of [[Chitinase]] with sequence from [http://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H0I OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CHIB_SERMA CHIB_SERMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/1h0i_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h0i ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Chitinase|Chitinase]]
+
*[[Chitinase 3D structures|Chitinase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:012093900</ref><references group="xtra"/>
+
[[Category: Gliocladium]]
-
[[Category: Chitinase]]
+
[[Category: Large Structures]]
[[Category: Serratia marcescens]]
[[Category: Serratia marcescens]]
-
[[Category: Aalten, D M.F.]]
+
[[Category: Aalten DMF]]
-
[[Category: Arai, N.]]
+
[[Category: Arai N]]
-
[[Category: Eijsink, V G.H.]]
+
[[Category: Eijsink VGH]]
-
[[Category: Houston, D R.]]
+
[[Category: Houston DR]]
-
[[Category: Omura, S.]]
+
[[Category: Omura S]]
-
[[Category: Peter, M G.]]
+
[[Category: Peter MG]]
-
[[Category: Shiomi, K.]]
+
[[Category: Shiomi K]]
-
[[Category: Synstad, B.]]
+
[[Category: Synstad B]]
-
[[Category: Turberg, A.]]
+
[[Category: Turberg A]]
-
[[Category: Argifin]]
+
-
[[Category: Chitin degradation]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Hydrolase-inhibitor complex]]
+
-
[[Category: Inhibitor]]
+

Current revision

Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium

PDB ID 1h0i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools