106m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:23, 7 February 2024) (edit) (undo)
 
(19 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:106m.gif|left|200px]]<br /><applet load="106m" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="106m, resolution 1.99&Aring;" />
 
-
'''SPERM WHALE MYOGLOBIN V68F ETHYL ISOCYANIDE AT PH 9.0'''<br />
 
-
==About this Structure==
+
==SPERM WHALE MYOGLOBIN V68F ETHYL ISOCYANIDE AT PH 9.0==
-
106M is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=HEM:'>HEM</scene> and <scene name='pdbligand=ENC:'>ENC</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=HEM:Ligand+Binding+Site'>HEM</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=106M OCA].
+
<StructureSection load='106m' size='340' side='right'caption='[[106m]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
-
[[Category: Physeter catodon]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[106m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=106M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=106M FirstGlance]. <br>
-
[[Category: Jr., G N.Phillips.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-
[[Category: Olson, J S.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ENC:ETHYL+ISOCYANIDE'>ENC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Smith, R D.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=106m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=106m OCA], [https://pdbe.org/106m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=106m RCSB], [https://www.ebi.ac.uk/pdbsum/106m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=106m ProSAT]</span></td></tr>
-
[[Category: ENC]]
+
</table>
-
[[Category: HEM]]
+
== Function ==
-
[[Category: SO4]]
+
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
-
[[Category: heme]]
+
== Evolutionary Conservation ==
-
[[Category: ligand binding]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: oxygen binding]]
+
Check<jmol>
-
[[Category: oxygen storage]]
+
<jmolCheckbox>
-
[[Category: oxygen transport]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/06/106m_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=106m ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:37:24 2008''
+
==See Also==
 +
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Physeter catodon]]
 +
[[Category: Olson JS]]
 +
[[Category: Phillips Jr GN]]
 +
[[Category: Smith RD]]

Current revision

SPERM WHALE MYOGLOBIN V68F ETHYL ISOCYANIDE AT PH 9.0

PDB ID 106m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools