This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4du8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:44, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4du8.jpg|left|200px]]
 
-
{{STRUCTURE_4du8| PDB=4du8 | SCENE= }}
+
==Crystal structure of Staphylococcus epidermidis D283A mevalonate diphosphate decarboxylase complexed with inhibitor DPGP==
-
 
+
<StructureSection load='4du8' size='340' side='right'caption='[[4du8]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===Crystal structure of Staphylococcus epidermidis D283A mevalonate diphosphate decarboxylase complexed with inhibitor DPGP===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4du8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_epidermidis Staphylococcus epidermidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DU8 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22734632}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2P0:1-({[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ACETYL)-L-PROLINE'>2P0</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4du8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4du8 OCA], [https://pdbe.org/4du8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4du8 RCSB], [https://www.ebi.ac.uk/pdbsum/4du8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4du8 ProSAT]</span></td></tr>
-
[[4du8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_epidermidis Staphylococcus epidermidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DU8 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/Q9FD73_STAEP Q9FD73_STAEP]
-
<ref group="xtra">PMID:022734632</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Diphosphomevalonate decarboxylase]]
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Staphylococcus epidermidis]]
[[Category: Staphylococcus epidermidis]]
-
[[Category: Barta, M L.]]
+
[[Category: Barta ML]]
-
[[Category: Geisbrecht, B V.]]
+
[[Category: Geisbrecht BV]]
-
[[Category: McWhorter, W J.]]
+
[[Category: McWhorter WJ]]
-
[[Category: Ghmp kinase family]]
+
-
[[Category: Lyase-lyase inhibitor complex]]
+

Current revision

Crystal structure of Staphylococcus epidermidis D283A mevalonate diphosphate decarboxylase complexed with inhibitor DPGP

PDB ID 4du8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools