1xhz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:50, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xhz.png|left|200px]]
 
-
{{STRUCTURE_1xhz| PDB=1xhz | SCENE= }}
+
==Phi29 DNA polymerase, orthorhombic crystal form, ssDNA complex==
-
 
+
<StructureSection load='1xhz' size='340' side='right'caption='[[1xhz]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
===Phi29 DNA polymerase, orthorhombic crystal form, ssDNA complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1xhz]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_virus_phi29 Bacillus virus phi29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XHZ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15546620}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhz OCA], [https://pdbe.org/1xhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xhz RCSB], [https://www.ebi.ac.uk/pdbsum/1xhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhz ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1xhz]] is a 8 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_phi29 Bacillus phage phi29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHZ OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/DPOL_BPPH2 DPOL_BPPH2] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/1xhz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xhz ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[DNA polymerase|DNA polymerase]]
+
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015546620</ref><references group="xtra"/>
+
[[Category: Bacillus virus phi29]]
-
[[Category: Bacillus phage phi29]]
+
[[Category: Large Structures]]
-
[[Category: DNA-directed DNA polymerase]]
+
[[Category: Berman AJ]]
-
[[Category: Berman, A J.]]
+
[[Category: Blanco L]]
-
[[Category: Blanco, L.]]
+
[[Category: Kamtekar S]]
-
[[Category: Kamtekar, S.]]
+
[[Category: Lazaro JM]]
-
[[Category: Lazaro, J M.]]
+
[[Category: Salas M]]
-
[[Category: Salas, M.]]
+
[[Category: Steitz TA]]
-
[[Category: Steitz, T A.]]
+
[[Category: Wang J]]
-
[[Category: Vega, M de.]]
+
[[Category: De Vega M]]
-
[[Category: Wang, J.]]
+
-
[[Category: Dna polymerase]]
+
-
[[Category: Processivity]]
+
-
[[Category: Protein-primed]]
+
-
[[Category: Replication]]
+
-
[[Category: Strand displacement]]
+
-
[[Category: Transferase-dna complex]]
+

Current revision

Phi29 DNA polymerase, orthorhombic crystal form, ssDNA complex

PDB ID 1xhz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1xhz"
Personal tools