1y67

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:53, 23 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1y67.png|left|200px]]
 
-
{{STRUCTURE_1y67| PDB=1y67 | SCENE= }}
+
==Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans==
-
 
+
<StructureSection load='1y67' size='340' side='right'caption='[[1y67]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
===Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1y67]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y67 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.853&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
[[1y67]] is a 4 chain structure of [[Superoxide Dismutase]] with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y67 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y67 OCA], [https://pdbe.org/1y67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y67 RCSB], [https://www.ebi.ac.uk/pdbsum/1y67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y67 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SODM_DEIRA SODM_DEIRA] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y6/1y67_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y67 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Superoxide Dismutase|Superoxide Dismutase]]
+
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Deinococcus radiodurans]]
[[Category: Deinococcus radiodurans]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Large Structures]]
-
[[Category: Chan, S.]]
+
[[Category: Chan S]]
-
[[Category: Perry, L J.]]
+
[[Category: Perry LJ]]
-
[[Category: Sawaya, M R.]]
+
[[Category: Sawaya MR]]
-
[[Category: Tanaka, S.]]
+
[[Category: Tanaka S]]
-
[[Category: Manganese enzyme]]
+
-
[[Category: Metalloprotein]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Superoxide dismutase]]
+

Current revision

Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans

PDB ID 1y67

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools