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3gas
From Proteopedia
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| - | [[Image:3gas.png|left|200px]] | ||
| - | + | ==Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme== | |
| - | + | <StructureSection load='3gas' size='340' side='right'caption='[[3gas]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3gas]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_nctc_11639 Helicobacter pylori nctc 11639]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GAS FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3gas]] is a 6 chain structure | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HugZ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=637383 Helicobacter pylori NCTC 11639])</td></tr> |
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Heme_oxygenase Heme oxygenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.3 1.14.99.3] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gas OCA], [https://pdbe.org/3gas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gas RCSB], [https://www.ebi.ac.uk/pdbsum/3gas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gas ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ga/3gas_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gas ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Heme oxygenase|Heme oxygenase]] | + | *[[Heme oxygenase 3D structures|Heme oxygenase 3D structures]] |
| - | [[Category: Helicobacter pylori]] | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Helicobacter pylori nctc 11639]] | ||
[[Category: Heme oxygenase]] | [[Category: Heme oxygenase]] | ||
| - | [[Category: Guo, G | + | [[Category: Large Structures]] |
| - | [[Category: Guo, Y | + | [[Category: Guo, G]] |
| - | [[Category: Hu, Y L | + | [[Category: Guo, Y]] |
| - | [[Category: Jiang, F | + | [[Category: Hu, Y L]] |
| - | [[Category: Wang, D C | + | [[Category: Jiang, F]] |
| - | [[Category: Zou, Q M | + | [[Category: Wang, D C]] |
| + | [[Category: Zou, Q M]] | ||
[[Category: Fmn-binding split barrel]] | [[Category: Fmn-binding split barrel]] | ||
| - | [[Category: Heme oxygenase]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
Current revision
Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme
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