This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3nff

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3nff" [edit=sysop:move=sysop])
Current revision (10:29, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3nff.png|left|200px]]
 
-
{{STRUCTURE_3nff| PDB=3nff | SCENE= }}
+
==Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5==
-
 
+
<StructureSection load='3nff' size='340' side='right'caption='[[3nff]], [[Resolution|resolution]] 3.24&Aring;' scene=''>
-
===Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3nff]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_glabrata Candida glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFF FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_20797630}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.24&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nff OCA], [https://pdbe.org/3nff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nff RCSB], [https://www.ebi.ac.uk/pdbsum/3nff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nff ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3nff]] is a 8 chain structure of [[RNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Candida_glabrata Candida glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFF OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q6FNZ9_CANGA Q6FNZ9_CANGA]
-
==See Also==
+
== Evolutionary Conservation ==
-
*[[RNA polymerase|RNA polymerase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==Reference==
+
<jmolCheckbox>
-
<ref group="xtra">PMID:020797630</ref><references group="xtra"/>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/3nff_consurf.spt"</scriptWhenChecked>
-
[[Category: Candida glabrata]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: DNA-directed RNA polymerase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cramer, P.]]
+
</jmolCheckbox>
-
[[Category: Geiger, S R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nff ConSurf].
-
[[Category: Hanecker, P.]]
+
<div style="clear:both"></div>
-
[[Category: Heck, A J.R.]]
+
__TOC__
-
[[Category: Kostrewa, D.]]
+
</StructureSection>
-
[[Category: Lorenzen, K.]]
+
[[Category: Large Structures]]
-
[[Category: Schreieck, A.]]
+
[[Category: Cramer P]]
-
[[Category: Dimerization]]
+
[[Category: Geiger SR]]
-
[[Category: Rna polymerase]]
+
[[Category: Hanecker P]]
-
[[Category: Transcription]]
+
[[Category: Heck AJR]]
-
[[Category: Triple barrel]]
+
[[Category: Kostrewa D]]
 +
[[Category: Lorenzen K]]
 +
[[Category: Schreieck A]]

Current revision

Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5

PDB ID 3nff

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools