1i97

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:33, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1i97.png|left|200px]]
 
-
{{STRUCTURE_1i97| PDB=1i97 | SCENE= }}
+
==CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE==
-
 
+
<StructureSection load='1i97' size='340' side='right'caption='[[1i97]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1i97]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I97 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1I97 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11296217}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TAC:TETRACYCLINE'>TAC</scene>, <scene name='pdbligand=WO2:OCTADECATUNGSTENYL+DIPHOSPHATE'>WO2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1i97 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i97 OCA], [https://pdbe.org/1i97 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1i97 RCSB], [https://www.ebi.ac.uk/pdbsum/1i97 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1i97 ProSAT]</span></td></tr>
-
[[1i97]] is a 21 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I97 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i9/1i97_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1i97 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ribosomal protein S10|Ribosomal protein S10]]
+
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
-
*[[Ribosomal protein S11|Ribosomal protein S11]]
+
-
*[[Ribosomal protein S12|Ribosomal protein S12]]
+
-
*[[Ribosomal protein S13|Ribosomal protein S13]]
+
-
*[[Ribosomal protein S14|Ribosomal protein S14]]
+
-
*[[Ribosomal protein S15|Ribosomal protein S15]]
+
-
*[[Ribosomal protein S16|Ribosomal protein S16]]
+
-
*[[Ribosomal protein S17|Ribosomal protein S17]]
+
-
*[[Ribosomal protein S18|Ribosomal protein S18]]
+
-
*[[Ribosomal protein S19|Ribosomal protein S19]]
+
-
*[[Ribosomal protein S2|Ribosomal protein S2]]
+
-
*[[Ribosomal protein S20|Ribosomal protein S20]]
+
-
*[[Ribosomal protein S3|Ribosomal protein S3]]
+
-
*[[Ribosomal protein S4|Ribosomal protein S4]]
+
-
*[[Ribosomal protein S5|Ribosomal protein S5]]
+
-
*[[Ribosomal protein S6|Ribosomal protein S6]]
+
-
*[[Ribosomal protein S7|Ribosomal protein S7]]
+
-
*[[Ribosomal protein S8|Ribosomal protein S8]]
+
-
*[[Ribosomal protein S9|Ribosomal protein S9]]
+
-
*[[Ribosomal protein THX|Ribosomal protein THX]]
+
*[[Ribosome|Ribosome]]
*[[Ribosome|Ribosome]]
-
 
+
*[[Ribosome 3D structures|Ribosome 3D structures]]
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:011296217</ref><ref group="xtra">PMID:015141029</ref><references group="xtra"/>
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Avila, H.]]
+
[[Category: Avila H]]
-
[[Category: Bartels, H.]]
+
[[Category: Bartels H]]
-
[[Category: Franceschi, F.]]
+
[[Category: Franceschi F]]
-
[[Category: Gluehmann, M.]]
+
[[Category: Gluehmann M]]
-
[[Category: Harms, J.]]
+
[[Category: Harms J]]
-
[[Category: Hartsch, T.]]
+
[[Category: Hartsch T]]
-
[[Category: Jacobi, C.]]
+
[[Category: Jacobi C]]
-
[[Category: Pioletti, M.]]
+
[[Category: Pioletti M]]
-
[[Category: Schluenzen, F.]]
+
[[Category: Schluenzen F]]
-
[[Category: Yonath, A.]]
+
[[Category: Yonath A]]
-
[[Category: Zarivach, R.]]
+
[[Category: Zarivach R]]
-
[[Category: 30s ribosome]]
+
-
[[Category: Antibiotic]]
+
-
[[Category: Ribosome]]
+
-
[[Category: Tetracycline]]
+

Current revision

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

PDB ID 1i97

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1i97"
Personal tools