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1r0v
From Proteopedia
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| - | [[Image:1r0v.png|left|200px]] | ||
| - | + | ==Structure Determination of the Dimeric Endonuclease in a Pseudo-face-centerd P21212 space group== | |
| - | + | <StructureSection load='1r0v' size='340' side='right'caption='[[1r0v]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1r0v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R0V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R0V FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r0v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r0v OCA], [https://pdbe.org/1r0v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r0v RCSB], [https://www.ebi.ac.uk/pdbsum/1r0v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r0v ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1r0v]] is a 4 chain structure | + | == Function == |
| + | [https://www.uniprot.org/uniprot/ENDA_ARCFU ENDA_ARCFU] Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r0/1r0v_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r0v ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Endonuclease|Endonuclease]] | + | *[[Endonuclease 3D structures|Endonuclease 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Archaeoglobus fulgidus DSM 4304]] | |
| - | [[Category: Archaeoglobus fulgidus]] | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Li H]] |
| - | [[Category: Li | + | [[Category: Zhang Y]] |
| - | [[Category: Zhang | + | |
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Current revision
Structure Determination of the Dimeric Endonuclease in a Pseudo-face-centerd P21212 space group
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