2ij9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2ij9" [edit=sysop:move=sysop])
Current revision (10:12, 30 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ij9.png|left|200px]]
 
-
{{STRUCTURE_2ij9| PDB=2ij9 | SCENE= }}
+
==Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus==
-
 
+
<StructureSection load='2ij9' size='340' side='right'caption='[[2ij9]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
===Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ij9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IJ9 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[2ij9]] is a 2 chain structure of [[Uridylate kinase]] with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ij9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ij9 OCA], [https://pdbe.org/2ij9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ij9 RCSB], [https://www.ebi.ac.uk/pdbsum/2ij9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ij9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ij9 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PYRH_ARCFU PYRH_ARCFU] Catalyzes the reversible phosphorylation of UMP to UDP (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ij9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ij9 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Uridylate kinase|Uridylate kinase]]
*[[Uridylate kinase|Uridylate kinase]]
-
[[Category: Archaeoglobus fulgidus]]
+
__TOC__
-
[[Category: Adams, J M.]]
+
</StructureSection>
-
[[Category: Almo, S C.]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Chen, R.]]
+
[[Category: Adams JM]]
-
[[Category: Dickey, M.]]
+
[[Category: Almo SC]]
-
[[Category: Keefe, L J.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Chen R]]
-
[[Category: Ozyurt, S.]]
+
[[Category: Dickey M]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Keefe LJ]]
-
[[Category: Sauder, J M.]]
+
[[Category: Ozyurt S]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Patskovsky Y]]
-
[[Category: Kinase]]
+
[[Category: Sauder JM]]
-
[[Category: New york sgx research center for structural genomics structural genomic]]
+
[[Category: Wasserman SR]]
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus

PDB ID 2ij9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools