2hyi

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[[Image:2hyi.png|left|200px]]
 
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{{STRUCTURE_2hyi| PDB=2hyi | SCENE= }}
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==Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA==
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<StructureSection load='2hyi' size='340' side='right'caption='[[2hyi]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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===Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2hyi]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HYI FirstGlance]. <br>
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{{ABSTRACT_PUBMED_16931718}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hyi OCA], [https://pdbe.org/2hyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hyi RCSB], [https://www.ebi.ac.uk/pdbsum/2hyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hyi ProSAT]</span></td></tr>
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[[2hyi]] is a 10 chain structure of [[Helicase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HYI OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MGN_HUMAN MGN_HUMAN] Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mRNA and thereby influences downstream processes of gene expression including mRNA splicing, nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Remains associated with the mRNA after its export to the cytoplasm and require translation of the mRNA for removal. The heterodimer MAGOH-RBM8A interacts with PYM that function to enhance the translation of EJC-bearing spliced mRNAs by recruiting them to the ribosomal 48S preinitiation complex.<ref>PMID:12730685</ref> <ref>PMID:16209946</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hy/2hyi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hyi ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Helicase|Helicase]]
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*[[Helicase 3D structures|Helicase 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:016931718</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Andersen, C B.F.]]
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[[Category: Large Structures]]
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[[Category: Andersen, G R.]]
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[[Category: Andersen CBF]]
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[[Category: Hir, H Le.]]
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[[Category: Andersen GR]]
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[[Category: Dead-box atpase]]
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[[Category: Le Hir H]]
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[[Category: Exon junction]]
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[[Category: Hydrolase-rna binding protein-rna complex]]
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[[Category: Mrna processing]]
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[[Category: Nonsense mediated decay]]
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[[Category: Splicing]]
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[[Category: Translation]]
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Current revision

Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA

PDB ID 2hyi

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