This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3e40

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:44, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3e40.png|left|200px]]
 
-
{{STRUCTURE_3e40| PDB=3e40 | SCENE= }}
+
==Q138F HincII bound to GTTAAC and cocrystallized with 5 mM Ca2+==
-
 
+
<StructureSection load='3e40' size='340' side='right'caption='[[3e40]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===Q138F HincII bound to GTTAAC and cocrystallized with 5 mM Ca2+===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3e40]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E40 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_18762194}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e40 OCA], [https://pdbe.org/3e40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e40 RCSB], [https://www.ebi.ac.uk/pdbsum/3e40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e40 ProSAT]</span></td></tr>
-
[[3e40]] is a 4 chain structure of [[Endonuclease]] with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E40 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/T2C2_HAEIF T2C2_HAEIF] Recognizes the double-stranded sequence GTYRAC and cleaves after Y-3.
==See Also==
==See Also==
-
*[[Endonuclease|Endonuclease]]
+
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:018762194</ref><references group="xtra"/>
+
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
-
[[Category: Type II site-specific deoxyribonuclease]]
+
[[Category: Large Structures]]
-
[[Category: Babic, A C.]]
+
[[Category: Babic AC]]
-
[[Category: Horton, N C.]]
+
[[Category: Horton NC]]
-
[[Category: Little, E J.]]
+
[[Category: Little EJ]]
-
[[Category: Manohar, V M.]]
+
[[Category: Manohar VM]]
-
[[Category: Endonuclease]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Indirect readout]]
+
-
[[Category: Nuclease]]
+
-
[[Category: Protein-dna complex]]
+
-
[[Category: Restriction system]]
+

Current revision

Q138F HincII bound to GTTAAC and cocrystallized with 5 mM Ca2+

PDB ID 3e40

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools