1nb2
From Proteopedia
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| - | [[Image:1nb2.png|left|200px]] | ||
| - | + | ==Crystal Structure of Nucleoside Diphosphate Kinase from Bacillus Halodenitrificans== | |
| - | + | <StructureSection load='1nb2' size='340' side='right'caption='[[1nb2]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1nb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Virgibacillus_halodenitrificans Virgibacillus halodenitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NB2 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nb2 OCA], [https://pdbe.org/1nb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nb2 RCSB], [https://www.ebi.ac.uk/pdbsum/1nb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nb2 ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1nb2]] is a 1 chain structure | + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q7SIA9_VIRHA Q7SIA9_VIRHA] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.[HAMAP-Rule:MF_00451] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nb/1nb2_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nb2 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Nucleoside diphosphate kinase|Nucleoside diphosphate kinase]] | + | *[[Nucleoside diphosphate kinase 3D structures|Nucleoside diphosphate kinase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| - | [[Category: | + | |
[[Category: Virgibacillus halodenitrificans]] | [[Category: Virgibacillus halodenitrificans]] | ||
| - | [[Category: Chang | + | [[Category: Chang T]] |
| - | [[Category: Chang | + | [[Category: Chang W-C]] |
| - | [[Category: Chen | + | [[Category: Chen C-J]] |
| - | [[Category: Gall | + | [[Category: Le Gall J]] |
| - | [[Category: Liu | + | [[Category: Liu M-Y]] |
| - | [[Category: Wang | + | [[Category: Wang B-C]] |
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Current revision
Crystal Structure of Nucleoside Diphosphate Kinase from Bacillus Halodenitrificans
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