1cdz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:25, 27 December 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1cdz.gif|left|200px]]<br /><applet load="1cdz" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1cdz, resolution 3.2&Aring;" />
 
-
'''BRCT DOMAIN FROM DNA-REPAIR PROTEIN XRCC1'''<br />
 
-
==Overview==
+
==BRCT DOMAIN FROM DNA-REPAIR PROTEIN XRCC1==
 +
<StructureSection load='1cdz' size='340' side='right'caption='[[1cdz]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1cdz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CDZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CDZ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdz OCA], [https://pdbe.org/1cdz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cdz RCSB], [https://www.ebi.ac.uk/pdbsum/1cdz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cdz ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XRCC1_HUMAN XRCC1_HUMAN] Corrects defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/1cdz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cdz ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
The BRCT domain (BRCA1 C-terminus), first identified in the breast cancer suppressor protein BRCA1, is an evolutionarily conserved protein-protein interaction region of approximately 95 amino acids found in a large number of proteins involved in DNA repair, recombination and cell cycle control. Here we describe the first three-dimensional structure and fold of a BRCT domain determined by X-ray crystallography at 3.2 A resolution. The structure has been obtained from the C-terminal region of the human DNA repair protein XRCC1, and comprises a four-stranded parallel beta-sheet surrounded by three alpha-helices, which form an autonomously folded domain. The compact XRCC1 structure explains the observed sequence homology between different BRCT motifs and provides a framework for modelling other BRCT domains. Furthermore, the established structure of an XRCC1 BRCT homodimer suggests potential protein-protein interaction sites for the complementary BRCT domain in DNA ligase III, since these two domains form a stable heterodimeric complex. Based on the XRCC1 BRCT structure, we have constructed a model for the C-terminal BRCT domain of BRCA1, which frequently is mutated in familial breast and ovarian cancer. The model allows insights into the effects of such mutations on the fold of the BRCT domain.
The BRCT domain (BRCA1 C-terminus), first identified in the breast cancer suppressor protein BRCA1, is an evolutionarily conserved protein-protein interaction region of approximately 95 amino acids found in a large number of proteins involved in DNA repair, recombination and cell cycle control. Here we describe the first three-dimensional structure and fold of a BRCT domain determined by X-ray crystallography at 3.2 A resolution. The structure has been obtained from the C-terminal region of the human DNA repair protein XRCC1, and comprises a four-stranded parallel beta-sheet surrounded by three alpha-helices, which form an autonomously folded domain. The compact XRCC1 structure explains the observed sequence homology between different BRCT motifs and provides a framework for modelling other BRCT domains. Furthermore, the established structure of an XRCC1 BRCT homodimer suggests potential protein-protein interaction sites for the complementary BRCT domain in DNA ligase III, since these two domains form a stable heterodimeric complex. Based on the XRCC1 BRCT structure, we have constructed a model for the C-terminal BRCT domain of BRCA1, which frequently is mutated in familial breast and ovarian cancer. The model allows insights into the effects of such mutations on the fold of the BRCT domain.
-
==About this Structure==
+
Structure of an XRCC1 BRCT domain: a new protein-protein interaction module.,Zhang X, Morera S, Bates PA, Whitehead PC, Coffer AI, Hainbucher K, Nash RA, Sternberg MJ, Lindahl T, Freemont PS EMBO J. 1998 Nov 2;17(21):6404-11. PMID:9799248<ref>PMID:9799248</ref>
-
1CDZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CDZ OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
Structure of an XRCC1 BRCT domain: a new protein-protein interaction module., Zhang X, Morera S, Bates PA, Whitehead PC, Coffer AI, Hainbucher K, Nash RA, Sternberg MJ, Lindahl T, Freemont PS, EMBO J. 1998 Nov 2;17(21):6404-11. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9799248 9799248]
+
</div>
 +
<div class="pdbe-citations 1cdz" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Bates, P.]]
+
[[Category: Bates P]]
-
[[Category: Coffer, A.]]
+
[[Category: Coffer A]]
-
[[Category: Freemont, P.]]
+
[[Category: Freemont P]]
-
[[Category: Hainbucher, K.]]
+
[[Category: Hainbucher K]]
-
[[Category: Lindahl, T.]]
+
[[Category: Lindahl T]]
-
[[Category: Morera, S.]]
+
[[Category: Morera S]]
-
[[Category: Nash, R.]]
+
[[Category: Nash R]]
-
[[Category: Sternberg, M.]]
+
[[Category: Sternberg M]]
-
[[Category: Whitehead, P.]]
+
[[Category: Whitehead P]]
-
[[Category: Zhang, X.]]
+
[[Category: Zhang X]]
-
[[Category: brca1]]
+
-
[[Category: brct]]
+
-
[[Category: protein-protein interaction]]
+
-
[[Category: xrcc1]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:05:02 2008''
+

Current revision

BRCT DOMAIN FROM DNA-REPAIR PROTEIN XRCC1

PDB ID 1cdz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools