This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3bvs
From Proteopedia
(Difference between revisions)
m (Protected "3bvs" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3bvs.png|left|200px]] | ||
| - | + | ==Crystal Structure of Bacillus cereus Alkylpurine DNA Glycosylase AlkD== | |
| - | + | <StructureSection load='3bvs' size='340' side='right'caption='[[3bvs]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3bvs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_10987 Bacillus cereus ATCC 10987]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BVS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BVS FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bvs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bvs OCA], [https://pdbe.org/3bvs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bvs RCSB], [https://www.ebi.ac.uk/pdbsum/3bvs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bvs ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3bvs]] is a 1 chain structure | + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q816E8_BACCR Q816E8_BACCR] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/3bvs_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bvs ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[DNA | + | *[[DNA glycosylase 3D structures|DNA glycosylase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Bacillus cereus ATCC 10987]] | |
| - | [[Category: Bacillus cereus]] | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Eichman BF]] |
| - | [[Category: | + | [[Category: Rubinson EH]] |
| - | [[Category: | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of Bacillus cereus Alkylpurine DNA Glycosylase AlkD
| |||||||||||

