We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2wab

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2wab" [edit=sysop:move=sysop])
Current revision (07:09, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2wab.png|left|200px]]
 
-
{{STRUCTURE_2wab| PDB=2wab | SCENE= }}
+
==Structure of an active site mutant of a family two carbohydrate esterase from Clostridium thermocellum in complex with celluohexase==
-
 
+
<StructureSection load='2wab' size='340' side='right'caption='[[2wab]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===STRUCTURE OF AN ACTIVE SITE MUTANT OF A FAMILY TWO CARBOHYDRATE ESTERASE FROM CLOSTRIDIUM THERMOCELLUM IN COMPLEX WITH CELLUOHEXASE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2wab]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WAB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WAB FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19338387}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PRD_900016:beta-cellopentaose'>PRD_900016</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wab OCA], [https://pdbe.org/2wab PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wab RCSB], [https://www.ebi.ac.uk/pdbsum/2wab PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wab ProSAT]</span></td></tr>
-
[[2wab]] is a 1 chain structure of [[Glucanase]] with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WAB OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CELE_ACET2 CELE_ACET2] Multifunctional enzyme involved in the degradation of plant cell wall polysaccharides. Displays endoglucanase activity against carboxymethyl cellulose (CMC) and barley beta-glucan (PubMed:3066698, PubMed:1991028). Also catalyzes the deacetylation of acetylated birchwood xylan and glucomannan, with a preference for the latter, and of the synthetic substrate 4-nitrophenyl acetate (4-NPAc) (PubMed:19338387).<ref>PMID:19338387</ref> <ref>PMID:1991028</ref> <ref>PMID:3066698</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wa/2wab_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wab ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:019338387</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Cellulase]]
+
</StructureSection>
-
[[Category: Clostridium thermocellum]]
+
[[Category: Acetivibrio thermocellus]]
-
[[Category: Bolam, D N.]]
+
[[Category: Large Structures]]
-
[[Category: Davies, G J.]]
+
[[Category: Bolam DN]]
-
[[Category: Dodson, E J.]]
+
[[Category: Davies GJ]]
-
[[Category: Flint, J E.]]
+
[[Category: Dodson EJ]]
-
[[Category: Fontes, C M.G A.]]
+
[[Category: Flint JE]]
-
[[Category: Gilbert, H J.]]
+
[[Category: Fontes CMGA]]
-
[[Category: Goyal, A.]]
+
[[Category: Gilbert HJ]]
-
[[Category: Izumi, A.]]
+
[[Category: Goyal A]]
-
[[Category: Kolenova, K.]]
+
[[Category: Izumi A]]
-
[[Category: Money, V A.]]
+
[[Category: Kolenova K]]
-
[[Category: Montainer, C.]]
+
[[Category: Money VA]]
-
[[Category: Pinheiro, B A.]]
+
[[Category: Montainer C]]
-
[[Category: Pires, V M.R.]]
+
[[Category: Pinheiro BA]]
-
[[Category: Prates, J A.M.]]
+
[[Category: Pires VMR]]
-
[[Category: Stalbrand, H.]]
+
[[Category: Prates JAM]]
-
[[Category: Topakas, E.]]
+
[[Category: Stalbrand H]]
-
[[Category: Carbohydrate binding]]
+
[[Category: Topakas E]]
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cellulase]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Esterase]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Plant cell wall degradation]]
+
-
[[Category: Polysaccharide degradation]]
+

Current revision

Structure of an active site mutant of a family two carbohydrate esterase from Clostridium thermocellum in complex with celluohexase

PDB ID 2wab

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools