1emi
From Proteopedia
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| - | [[Image:1emi.png|left|200px]] | ||
| - | + | ==STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8.== | |
| - | + | <StructureSection load='1emi' size='340' side='right'caption='[[1emi]], [[Resolution|resolution]] 7.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1emi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EMI FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 7.5Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1emi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1emi OCA], [https://pdbe.org/1emi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1emi RCSB], [https://www.ebi.ac.uk/pdbsum/1emi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1emi ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1emi]] is a 2 chain structure | + | == Function == |
| + | [https://www.uniprot.org/uniprot/RS8_THET8 RS8_THET8] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit central domain. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.[HAMAP-Rule:MF_01302_B] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/1emi_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1emi ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Ribosomal protein S8|Ribosomal protein S8]] | *[[Ribosomal protein S8|Ribosomal protein S8]] | ||
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
| - | [[Category: Cate | + | [[Category: Cate JH]] |
| - | [[Category: Culver | + | [[Category: Culver GM]] |
| - | [[Category: Lancaster | + | [[Category: Lancaster L]] |
| - | [[Category: Noller | + | [[Category: Noller HF]] |
| - | [[Category: Yuspov | + | [[Category: Yuspov MM]] |
| - | [[Category: Yusupova | + | [[Category: Yusupova GZ]] |
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Current revision
STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8.
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