This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3njq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:00, 14 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3njq.png|left|200px]]
 
-
{{STRUCTURE_3njq| PDB=3njq | SCENE= }}
+
==Crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with dimer disruptor==
-
 
+
<StructureSection load='3njq' size='340' side='right'caption='[[3njq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with dimer disruptor===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3njq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_herpesvirus_8_type_M Human herpesvirus 8 type M]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NJQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NJQ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21723875}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NJQ:3-BENZYL-4-({[6-(CYCLOHEXYLMETHYL)PYRIDIN-2-YL]CARBONYL}AMINO)BENZOIC+ACID'>NJQ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3njq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3njq OCA], [https://pdbe.org/3njq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3njq RCSB], [https://www.ebi.ac.uk/pdbsum/3njq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3njq ProSAT]</span></td></tr>
-
[[3njq]] is a 2 chain structure of [[Virus protease]] with sequence from [http://en.wikipedia.org/wiki/Human_herpesvirus_8_type_m Human herpesvirus 8 type m]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NJQ OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/P88911_HHV8 P88911_HHV8]
==See Also==
==See Also==
-
*[[Virus protease|Virus protease]]
+
*[[Virus protease 3D structures|Virus protease 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:021723875</ref><references group="xtra"/>
+
[[Category: Human herpesvirus 8 type M]]
-
[[Category: Human herpesvirus 8 type m]]
+
[[Category: Large Structures]]
-
[[Category: Baharuddin, A.]]
+
[[Category: Baharuddin A]]
-
[[Category: Herpesvirus protease]]
+
-
[[Category: Kshv]]
+
-
[[Category: Kshv protease]]
+
-
[[Category: Protein-dimer disruptor complex]]
+
-
[[Category: Viral protein-inhibitor complex]]
+

Current revision

Crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with dimer disruptor

PDB ID 3njq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools