1aut

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[[Image:1aut.gif|left|200px]]<br />
 
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<applet load="1aut" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1aut, resolution 2.8&Aring;" />
 
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'''HUMAN ACTIVATED PROTEIN C'''<br />
 
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==Overview==
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==Human activated protein C==
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The structure of the Gla-domainless form of the human anticoagulant enzyme, activated protein C has been solved at 2.8 A resolution. The light chain, is composed of two domains: an epidermal growth factor (EGF)-like domain, modified by a large insert containing an additional disulfide, followed by, a typical EGF-like domain. The arrangement of the long axis of these, domains describes an angle of approximately 80 degrees. Disulfide linked, to the light chain is the catalytic domain, which is generally, trypsin-like but contains a large insertion loop at the edge of the active, site, a third helical segment, a prominent cationic patch analogous to the, anion binding exosite I of thrombin and a trypsin-like Ca[II] binding, site. The arrangement of loops around the active site partially ... [[http://ispc.weizmann.ac.il/pmbin/getpm?9003757 (full description)]]
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<StructureSection load='1aut' size='340' side='right'caption='[[1aut]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[1aut]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AUT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AUT FirstGlance]. <br>
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1AUT is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]]. Active as [[http://en.wikipedia.org/wiki/Protein_C_(activated) Protein C (activated)]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.69 3.4.21.69]]. Structure known Active Site: CAT. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1AUT OCA]].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE'>0G6</scene>, <scene name='pdbligand=BHD:(3S)-3-HYDROXY-L-ASPARTIC+ACID'>BHD</scene></td></tr>
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==Reference==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aut FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aut OCA], [https://pdbe.org/1aut PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aut RCSB], [https://www.ebi.ac.uk/pdbsum/1aut PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aut ProSAT]</span></td></tr>
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The 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J. 1996 Dec 16;15(24):6822-31. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9003757 9003757]
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</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/PROC_HUMAN PROC_HUMAN] Defects in PROC are the cause of thrombophilia due to protein C deficiency, autosomal dominant (THPH3) [MIM:[https://omim.org/entry/176860 176860]. A hemostatic disorder characterized by impaired regulation of blood coagulation and a tendency to recurrent venous thrombosis. However, many adults with heterozygous disease may be asymptomatic. Individuals with decreased amounts of protein C are classically referred to as having type I protein C deficiency and those with normal amounts of a functionally defective protein as having type II deficiency.<ref>PMID:8560401</ref> <ref>PMID:2437584</ref> <ref>PMID:2602169</ref> <ref>PMID:1868249</ref> <ref>PMID:1347706</ref> <ref>PMID:1511989</ref> <ref>PMID:1301959</ref> <ref>PMID:8499568</ref> <ref>PMID:8292730</ref> <ref>PMID:8398832</ref> <ref>PMID:7865674</ref> <ref>PMID:7792728</ref> <ref>PMID:8829639</ref> <ref>PMID:9798967</ref> Defects in PROC are the cause of thrombophilia due to protein C deficiency, autosomal recessive (THPH4) [MIM:[https://omim.org/entry/612304 612304]. A hemostatic disorder characterized by impaired regulation of blood coagulation and a tendency to recurrent venous thrombosis. It results in a thrombotic condition that can manifest as a severe neonatal disorder or as a milder disorder with late-onset thrombophilia. The severe form leads to neonatal death through massive neonatal venous thrombosis. Often associated with ecchymotic skin lesions which can turn necrotic called purpura fulminans, this disorder is very rare.
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== Function ==
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[https://www.uniprot.org/uniprot/PROC_HUMAN PROC_HUMAN] Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/au/1aut_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aut ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Protein C (activated)]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Bode W]]
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[[Category: Bode, W.]]
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[[Category: Esmon C]]
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[[Category: Esmon, C.]]
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[[Category: Foundling S]]
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[[Category: Foundling, S.]]
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[[Category: Hof P]]
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[[Category: Hof, P.]]
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[[Category: Huber R]]
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[[Category: Huber, R.]]
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[[Category: Mather T]]
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[[Category: Mather, T.]]
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[[Category: Oganessyan V]]
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[[Category: Oganessyan, V.]]
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[[Category: complex (blood coagulation/inhibitor)]]
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[[Category: glycoprotein]]
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[[Category: hydrolase]]
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[[Category: plasma calcium binding]]
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[[Category: serine proteinase)]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 13:48:16 2007''
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Current revision

Human activated protein C

PDB ID 1aut

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