1nw8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1nw8" [edit=sysop:move=sysop])
Current revision (08:00, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nw8.png|left|200px]]
 
-
{{STRUCTURE_1nw8| PDB=1nw8 | SCENE= }}
+
==Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI==
-
 
+
<StructureSection load='1nw8' size='340' side='right'caption='[[1nw8]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
===Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1nw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NW8 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12732637}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nw8 OCA], [https://pdbe.org/1nw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nw8 RCSB], [https://www.ebi.ac.uk/pdbsum/1nw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nw8 ProSAT]</span></td></tr>
-
[[1nw8]] is a 1 chain structure of [[DNA methyltransferase]] with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NW8 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MTR1_CERSP MTR1_CERSP] A beta subtype methylase, recognizes the double-stranded sequence 5'-GAATTC-3', methylates A-3 on both strands, and protects the DNA from cleavage by the RsrI endonuclease.<ref>PMID:2690017</ref> <ref>PMID:12654995</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nw/1nw8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nw8 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[DNA methyltransferase|DNA methyltransferase]]
+
*[[DNA methyltransferase 3D structures|DNA methyltransferase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:012732637</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Rhodobacter sphaeroides]]
+
</StructureSection>
-
[[Category: Churchill, M E.A.]]
+
[[Category: Cereibacter sphaeroides]]
-
[[Category: Gumport, R I.]]
+
[[Category: Large Structures]]
-
[[Category: Scavetta, R D.]]
+
[[Category: Churchill MEA]]
-
[[Category: Thomas, C B.]]
+
[[Category: Gumport RI]]
-
[[Category: Adenine dna methyltransferase]]
+
[[Category: Scavetta RD]]
-
[[Category: Rossmann fold]]
+
[[Category: Thomas CB]]
-
[[Category: Transferase]]
+

Current revision

Structure of L72P mutant beta class N6-adenine DNA methyltransferase RsrI

PDB ID 1nw8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools