1dbv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1dbv" [edit=sysop:move=sysop])
Current revision (06:51, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1dbv.png|left|200px]]
 
-
{{STRUCTURE_1dbv| PDB=1dbv | SCENE= }}
+
==GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE MUTANT WITH ASP 32 REPLACED BY GLY, LEU 187 REPLACED BY ALA, AND PRO 188 REPLACED BY SER COMPLEXED WITH NAD+==
-
 
+
<StructureSection load='1dbv' size='340' side='right'caption='[[1dbv]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
===GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE MUTANT WITH ASP 32 REPLACED BY GLY, LEU 187 REPLACED BY ALA, AND PRO 188 REPLACED BY SER COMPLEXED WITH NAD+===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1dbv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DBV FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_9175858}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dbv OCA], [https://pdbe.org/1dbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dbv RCSB], [https://www.ebi.ac.uk/pdbsum/1dbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dbv ProSAT]</span></td></tr>
-
[[1dbv]] is a 4 chain structure of [[Aldehyde dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DBV OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G3P_GEOSE G3P_GEOSE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/1dbv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dbv ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Aldehyde dehydrogenase|Aldehyde dehydrogenase]]
+
*[[Aldehyde dehydrogenase 3D structures|Aldehyde dehydrogenase 3D structures]]
-
 
+
*[[Glyceraldehyde-3-phosphate dehydrogenase 3D structures|Glyceraldehyde-3-phosphate dehydrogenase 3D structures]]
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:009175858</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Aubry, A.]]
+
[[Category: Large Structures]]
-
[[Category: Branlant, G.]]
+
[[Category: Aubry A]]
-
[[Category: Dideberg, O.]]
+
[[Category: Branlant G]]
-
[[Category: Didierjean, C.]]
+
[[Category: Dideberg O]]
-
[[Category: Rahuel-Clermont, S.]]
+
[[Category: Didierjean C]]
-
[[Category: Vitoux, B.]]
+
[[Category: Rahuel-Clermont S]]
-
[[Category: Oxidoreductase]]
+
[[Category: Vitoux B]]

Current revision

GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE MUTANT WITH ASP 32 REPLACED BY GLY, LEU 187 REPLACED BY ALA, AND PRO 188 REPLACED BY SER COMPLEXED WITH NAD+

PDB ID 1dbv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools