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1brd
From Proteopedia
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| - | [[Image:1brd.png|left|200px]] | ||
| - | + | ==Model for the structure of Bacteriorhodopsin based on high-resolution Electron Cryo-microscopy== | |
| - | + | <StructureSection load='1brd' size='340' side='right'caption='[[1brd]], [[Resolution|resolution]] 3.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1brd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BRD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BRD FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron crystallography, [[Resolution|Resolution]] 3.5Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1brd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1brd OCA], [https://pdbe.org/1brd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1brd RCSB], [https://www.ebi.ac.uk/pdbsum/1brd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1brd ProSAT]</span></td></tr> |
| - | [[1brd]] is a 1 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/1brd_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1brd ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Bacteriorhodopsin|Bacteriorhodopsin]] | + | *[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Halobacterium salinarum]] | [[Category: Halobacterium salinarum]] | ||
| - | [[Category: Baldwin | + | [[Category: Large Structures]] |
| - | [[Category: Beckmann | + | [[Category: Baldwin JM]] |
| - | [[Category: Ceska | + | [[Category: Beckmann E]] |
| - | [[Category: Downing | + | [[Category: Ceska TA]] |
| - | [[Category: Henderson | + | [[Category: Downing KH]] |
| - | [[Category: Zemlin | + | [[Category: Henderson R]] |
| - | + | [[Category: Zemlin F]] | |
Current revision
Model for the structure of Bacteriorhodopsin based on high-resolution Electron Cryo-microscopy
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