1ryq

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[[Image:1ryq.png|left|200px]]
 
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{{STRUCTURE_1ryq| PDB=1ryq | SCENE= }}
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==Putative DNA-directed RNA polymerase, subunit e'' from Pyrococcus Furiosus Pfu-263306-001==
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<StructureSection load='1ryq' size='340' side='right'caption='[[1ryq]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
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===Putative DNA-directed RNA polymerase, subunit e'' from Pyrococcus Furiosus Pfu-263306-001===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1ryq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RYQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RYQ FirstGlance]. <br>
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{{ABSTRACT_PUBMED_15858261}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ryq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ryq OCA], [https://pdbe.org/1ryq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ryq RCSB], [https://www.ebi.ac.uk/pdbsum/1ryq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ryq ProSAT], [https://www.topsan.org/Proteins/SECSG/1ryq TOPSAN]</span></td></tr>
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[[1ryq]] is a 1 chain structure of [[RNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RYQ OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SPT4_PYRFU SPT4_PYRFU] Stimulates transcription elongation.<ref>PMID:21386817</ref> <ref>PMID:21187417</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ry/1ryq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ryq ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[RNA polymerase|RNA polymerase]]
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*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:015858261</ref><ref group="xtra">PMID:015930619</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
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[[Category: Adams, M W.W.]]
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[[Category: Adams MWW]]
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[[Category: Brereton, P S.]]
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[[Category: Arendall III WB]]
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[[Category: Chen, L.]]
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[[Category: Brereton PS]]
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[[Category: II, F L.Poole.]]
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[[Category: Chen L]]
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[[Category: III, W B.Arendall.]]
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[[Category: Izumi M]]
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[[Category: Izumi, M.]]
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[[Category: Jenney Jr FE]]
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[[Category: Jenney, F E.]]
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[[Category: Lee HS]]
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[[Category: Lee, H S.]]
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[[Category: Liu Z-J]]
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[[Category: Liu, Z J.]]
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[[Category: Poole II FL]]
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[[Category: Richardson, D C.]]
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[[Category: Richardson DC]]
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[[Category: Richardson, J S.]]
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[[Category: Richardson JS]]
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[[Category: Rose, J P.]]
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[[Category: Rose JP]]
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[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
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[[Category: Shah A]]
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[[Category: Shah, A.]]
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[[Category: Shah C]]
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[[Category: Shah, C.]]
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[[Category: Sugar FJ]]
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[[Category: Sugar, F J.]]
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[[Category: Tempel W]]
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[[Category: Tempel, W.]]
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[[Category: Wang B-C]]
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[[Category: Wang, B C.]]
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[[Category: Protein structure initiative]]
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[[Category: Psi]]
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[[Category: Rna polymerase]]
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[[Category: Secsg]]
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[[Category: Southeast collaboratory for structural genomic]]
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[[Category: Structural genomic]]
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[[Category: Transferase]]
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Current revision

Putative DNA-directed RNA polymerase, subunit e from Pyrococcus Furiosus Pfu-263306-001

PDB ID 1ryq

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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