This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3odh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:34, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3odh.png|left|200px]]
 
-
{{STRUCTURE_3odh| PDB=3odh | SCENE= }}
+
==Structure of OkrAI/DNA complex==
-
 
+
<StructureSection load='3odh' size='340' side='right'caption='[[3odh]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
===Structure of OkrAI/DNA complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3odh]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Oceanobacter_kriegii Oceanobacter kriegii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ODH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ODH FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_20833632}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3odh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3odh OCA], [https://pdbe.org/3odh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3odh RCSB], [https://www.ebi.ac.uk/pdbsum/3odh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3odh ProSAT]</span></td></tr>
-
[[3odh]] is a 8 chain structure of [[Endonuclease]] with sequence from [http://en.wikipedia.org/wiki/Oceanobacter_kriegii Oceanobacter kriegii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ODH OCA].
+
</table>
==See Also==
==See Also==
-
*[[Endonuclease|Endonuclease]]
+
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:020833632</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Oceanobacter kriegii]]
[[Category: Oceanobacter kriegii]]
-
[[Category: Aggarwal, A K.]]
+
[[Category: Aggarwal AK]]
-
[[Category: Vanamee, E S.]]
+
[[Category: Vanamee ES]]
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Phosphodiesterase]]
+
-
[[Category: Restriction endonuclease-like]]
+

Current revision

Structure of OkrAI/DNA complex

PDB ID 3odh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools