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1rkp

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[[Image:1rkp.png|left|200px]]
 
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{{STRUCTURE_1rkp| PDB=1rkp | SCENE= }}
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==Crystal structure of PDE5A1-IBMX==
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<StructureSection load='1rkp' size='340' side='right'caption='[[1rkp]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
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===Crystal structure of PDE5A1-IBMX===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1rkp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RKP FirstGlance]. <br>
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{{ABSTRACT_PUBMED_14668322}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IBM:3-ISOBUTYL-1-METHYLXANTHINE'>IBM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rkp OCA], [https://pdbe.org/1rkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rkp RCSB], [https://www.ebi.ac.uk/pdbsum/1rkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rkp ProSAT]</span></td></tr>
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[[1rkp]] is a 1 chain structure of [[Phosphodiesterase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RKP OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PDE5A_HUMAN PDE5A_HUMAN] Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides. This phosphodiesterase catalyzes the specific hydrolysis of cGMP to 5'-GMP.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/1rkp_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rkp ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Phosphodiesterase|Phosphodiesterase]]
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*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:014668322</ref><references group="xtra"/>
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[[Category: 3',5'-cyclic-nucleotide phosphodiesterase]]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Corbin, J D.]]
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[[Category: Large Structures]]
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[[Category: Francis, S H.]]
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[[Category: Corbin JD]]
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[[Category: Huai, Q.]]
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[[Category: Francis SH]]
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[[Category: Ke, H.]]
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[[Category: Huai Q]]
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[[Category: Liu, Y.]]
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[[Category: Ke H]]
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[[Category: Hydrolase]]
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[[Category: Liu Y]]
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[[Category: Ibmx]]
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[[Category: Pde5a]]
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[[Category: Viagra]]
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Current revision

Crystal structure of PDE5A1-IBMX

PDB ID 1rkp

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