This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1m1p
From Proteopedia
(Difference between revisions)
| (9 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1m1p.png|left|200px]] | ||
| - | + | ==P21 crystal structure of the tetraheme cytochrome c3 from Shewanella oneidensis MR1== | |
| - | + | <StructureSection load='1m1p' size='340' side='right'caption='[[1m1p]], [[Resolution|resolution]] 1.55Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1m1p]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis Shewanella oneidensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M1P FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m1p OCA], [https://pdbe.org/1m1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m1p RCSB], [https://www.ebi.ac.uk/pdbsum/1m1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m1p ProSAT]</span></td></tr> |
| - | [[1m1p]] is a 6 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8EDL6_SHEON Q8EDL6_SHEON] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m1/1m1p_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m1p ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Cytochrome | + | *[[Cytochrome C 3D structures|Cytochrome C 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Shewanella oneidensis]] | [[Category: Shewanella oneidensis]] | ||
| - | + | [[Category: Cusanovich MA]] | |
| - | [[Category: Cusanovich | + | [[Category: Leys D]] |
| - | [[Category: Leys | + | [[Category: Meyer TE]] |
| - | [[Category: Meyer | + | [[Category: Nealson KH]] |
| - | [[Category: Nealson | + | [[Category: Tsapin AI]] |
| - | [[Category: Tsapin | + | [[Category: Van Beeumen JJ]] |
| - | [[Category: | + | |
| - | + | ||
Current revision
P21 crystal structure of the tetraheme cytochrome c3 from Shewanella oneidensis MR1
| |||||||||||
