This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3csb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3csb" [edit=sysop:move=sysop])
Current revision (09:37, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3csb.png|left|200px]]
 
-
{{STRUCTURE_3csb| PDB=3csb | SCENE= }}
+
==Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex==
-
 
+
<StructureSection load='3csb' size='340' side='right'caption='[[3csb]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3csb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CSB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CSB FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_18602117}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.999&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3csb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3csb OCA], [https://pdbe.org/3csb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3csb RCSB], [https://www.ebi.ac.uk/pdbsum/3csb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3csb ProSAT]</span></td></tr>
-
[[3csb]] is a 1 chain structure of [[Maltose-binding protein]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli,_synthetic Escherichia coli, synthetic]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CSB OCA].
+
</table>
-
 
+
== Function ==
-
==See Also==
+
[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.
-
*[[Maltose-binding protein|Maltose-binding protein]]
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==Reference==
+
Check<jmol>
-
<ref group="xtra">PMID:018602117</ref><references group="xtra"/>
+
<jmolCheckbox>
-
[[Category: Escherichia coli, synthetic]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/3csb_consurf.spt"</scriptWhenChecked>
-
[[Category: Gilbreth, R N.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Koide, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Antibody mimic]]
+
</jmolCheckbox>
-
[[Category: De novo protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3csb ConSurf].
-
[[Category: Engineered binding protein]]
+
<div style="clear:both"></div>
-
[[Category: Minimalist protein interface]]
+
__TOC__
-
[[Category: Sugar binding protein]]
+
</StructureSection>
-
[[Category: Synthetic protein interface]]
+
[[Category: Escherichia coli]]
 +
[[Category: Large Structures]]
 +
[[Category: Synthetic construct]]
 +
[[Category: Gilbreth RN]]
 +
[[Category: Koide S]]

Current revision

Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex

PDB ID 3csb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools