3nfh
From Proteopedia
(Difference between revisions)
m (Protected "3nfh" [edit=sysop:move=sysop]) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3nfh.png|left|200px]] | ||
| - | + | ==Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49 (P4)== | |
| - | + | <StructureSection load='3nfh' size='340' side='right'caption='[[3nfh]], [[Resolution|resolution]] 2.17Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3nfh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFH FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nfh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfh OCA], [https://pdbe.org/3nfh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nfh RCSB], [https://www.ebi.ac.uk/pdbsum/3nfh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfh ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3nfh]] is a 2 chain structure | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/RPA49_YEAST RPA49_YEAST] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase I which synthesizes ribosomal RNA precursors. A49 is easily dissociated from the rest of pol A (pol I), producing the form A*, which shows impaired transcriptional activity and increased sensitivity to alpha-amanitin. The function of A49 might be linked to the RNase H activity that was found associated with this subunit. | |
| - | == | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | < | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/3nfh_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nfh ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Saccharomyces cerevisiae]] | [[Category: Saccharomyces cerevisiae]] | ||
| - | [[Category: Cramer | + | [[Category: Cramer P]] |
| - | [[Category: Geiger | + | [[Category: Geiger SR]] |
| - | [[Category: Hanecker | + | [[Category: Hanecker P]] |
| - | [[Category: Heck | + | [[Category: Heck AJR]] |
| - | [[Category: Kostrewa | + | [[Category: Kostrewa D]] |
| - | [[Category: Lorenzen | + | [[Category: Lorenzen K]] |
| - | [[Category: Schreieck | + | [[Category: Schreieck A]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49 (P4)
| |||||||||||
