3u2d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:16, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3u2d.png|left|200px]]
 
-
{{STRUCTURE_3u2d| PDB=3u2d | SCENE= }}
+
==S. aureus GyrB ATPase domain in complex with small molecule inhibitor==
-
 
+
<StructureSection load='3u2d' size='340' side='right'caption='[[3u2d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
===S. aureus GyrB ATPase domain in complex with small molecule inhibitor===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3u2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U2D FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22183167}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=08B:4-BROMO-5-METHYL-N-[1-(3-NITROPYRIDIN-2-YL)PIPERIDIN-4-YL]-1H-PYRROLE-2-CARBOXAMIDE'>08B</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u2d OCA], [https://pdbe.org/3u2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u2d RCSB], [https://www.ebi.ac.uk/pdbsum/3u2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u2d ProSAT]</span></td></tr>
-
[[3u2d]] is a 2 chain structure of [[Gyrase]] with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U2D OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GYRB_STAAU GYRB_STAAU] DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.[HAMAP-Rule:MF_01898]
==See Also==
==See Also==
-
*[[Gyrase|Gyrase]]
+
*[[Gyrase 3D Structures|Gyrase 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022183167</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Boriack-Sjodin, P A.]]
+
[[Category: Boriack-Sjodin PA]]
-
[[Category: Eakin, A E.]]
+
[[Category: Eakin AE]]
-
[[Category: Prince, D B.]]
+
[[Category: Prince DB]]
-
[[Category: Sherer, B A.]]
+
[[Category: Sherer BA]]
-
[[Category: Antimicrobial]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Isomerase-isomerase inhibitor complex]]
+
-
[[Category: Protein-inhibitor complex]]
+
-
[[Category: Structure-based drug design]]
+

Current revision

S. aureus GyrB ATPase domain in complex with small molecule inhibitor

PDB ID 3u2d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools