2br8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2br8" [edit=sysop:move=sysop])
Current revision (09:01, 6 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2br8.png|left|200px]]
 
-
{{STRUCTURE_2br8| PDB=2br8 | SCENE= }}
+
==Crystal Structure of Acetylcholine-binding Protein (AChBP) from Aplysia californica in complex with an alpha-conotoxin PnIA variant==
 +
<StructureSection load='2br8' size='340' side='right'caption='[[2br8]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2br8]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica] and [https://en.wikipedia.org/wiki/Conus_pennaceus Conus pennaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BR8 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2br8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2br8 OCA], [https://pdbe.org/2br8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2br8 RCSB], [https://www.ebi.ac.uk/pdbsum/2br8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2br8 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8WSF8_APLCA Q8WSF8_APLCA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/2br8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2br8 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Conotoxins (Ctx) form a large family of peptide toxins from cone snail venoms that act on a broad spectrum of ion channels and receptors. The subgroup alpha-Ctx specifically and selectively binds to subtypes of nicotinic acetylcholine receptors (nAChRs), which are targets for treatment of several neurological disorders. Here we present the structure at a resolution of 2.4 A of alpha-Ctx PnIA (A10L D14K), a potent blocker of the alpha(7)-nAChR, bound with high affinity to acetylcholine binding protein (AChBP), the prototype for the ligand-binding domains of the nAChR superfamily. Alpha-Ctx is buried deep within the ligand-binding site and interacts with residues on both faces of adjacent subunits. The toxin itself does not change conformation, but displaces the C loop of AChBP and induces a rigid-body subunit movement. Knowledge of these contacts could facilitate the rational design of drug leads using the Ctx framework and may lead to compounds with increased receptor subtype selectivity.
-
===CRYSTAL STRUCTURE OF ACETYLCHOLINE-BINDING PROTEIN (ACHBP) FROM APLYSIA CALIFORNICA IN COMPLEX WITH AN ALPHA-CONOTOXIN PNIA VARIANT===
+
Crystal structure of nicotinic acetylcholine receptor homolog AChBP in complex with an alpha-conotoxin PnIA variant.,Celie PH, Kasheverov IE, Mordvintsev DY, Hogg RC, van Nierop P, van Elk R, van Rossum-Fikkert SE, Zhmak MN, Bertrand D, Tsetlin V, Sixma TK, Smit AB Nat Struct Mol Biol. 2005 Jul;12(7):582-8. Epub 2005 Jun 12. PMID:15951818<ref>PMID:15951818</ref>
-
{{ABSTRACT_PUBMED_15951818}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 2br8" style="background-color:#fffaf0;"></div>
-
[[2br8]] is a 10 chain structure of [[Acetylcholine binding protein]] with sequence from [http://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BR8 OCA].
+
==See Also==
==See Also==
-
*[[Acetylcholine binding protein|Acetylcholine binding protein]]
+
*[[Acetylcholine binding protein 3D structures|Acetylcholine binding protein 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:015951818</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Aplysia californica]]
[[Category: Aplysia californica]]
-
[[Category: Bertrand, D.]]
+
[[Category: Conus pennaceus]]
-
[[Category: Celie, P H.N.]]
+
[[Category: Large Structures]]
-
[[Category: Elk, R Van.]]
+
[[Category: Bertrand D]]
-
[[Category: Hogg, R C.]]
+
[[Category: Celie PHN]]
-
[[Category: Kasheverov, I E.]]
+
[[Category: Hogg RC]]
-
[[Category: Mordvintsev, D Y.]]
+
[[Category: Kasheverov IE]]
-
[[Category: Nierop, P Van.]]
+
[[Category: Mordvintsev DY]]
-
[[Category: Rossum-Fikkert, S E.Van.]]
+
[[Category: Sixma TK]]
-
[[Category: Sixma, T K.]]
+
[[Category: Smit AB]]
-
[[Category: Smit, A B.]]
+
[[Category: Tsetlin V]]
-
[[Category: Tsetlin, V.]]
+
[[Category: Zhmak MN]]
-
[[Category: Zhmak, M N.]]
+
[[Category: Van Elk R]]
-
[[Category: Acetylcholine receptor inhibitor]]
+
[[Category: Van Nierop P]]
-
[[Category: Alpha-conotoxin]]
+
[[Category: Van Rossum-Fikkert SE]]
-
[[Category: Amidation]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Igg-fold]]
+
-
[[Category: Immunoglobulin domain]]
+
-
[[Category: Neurotoxin]]
+
-
[[Category: Nicotinic receptor]]
+
-
[[Category: Pentamer]]
+
-
[[Category: Postsynaptic neurotoxin]]
+
-
[[Category: Receptor]]
+
-
[[Category: Receptor-inhibitor complex]]
+
-
[[Category: Receptor/inhibitor]]
+
-
[[Category: Sulfation]]
+
-
[[Category: Toxin]]
+

Current revision

Crystal Structure of Acetylcholine-binding Protein (AChBP) from Aplysia californica in complex with an alpha-conotoxin PnIA variant

PDB ID 2br8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools