This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ecc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ecc" [edit=sysop:move=sysop])
Current revision (09:46, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ecc.png|left|200px]]
 
-
{{STRUCTURE_3ecc| PDB=3ecc | SCENE= }}
+
==Crystal structure of the DnaC helicase loader in complex with ADP-BeF3==
-
 
+
<StructureSection load='3ecc' size='340' side='right'caption='[[3ecc]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
===Crystal structure of the DnaC helicase loader in complex with ADP-BeF3===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3ecc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ECC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ECC FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19013274}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ecc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ecc OCA], [https://pdbe.org/3ecc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ecc RCSB], [https://www.ebi.ac.uk/pdbsum/3ecc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ecc ProSAT]</span></td></tr>
-
[[3ecc]] is a 1 chain structure of [[DnaC helicase loader]] with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ECC OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O67056_AQUAE O67056_AQUAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/3ecc_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ecc ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[DnaC helicase loader|DnaC helicase loader]]
*[[DnaC helicase loader|DnaC helicase loader]]
-
*[[Structure of E. coli DnaC helicase loader|Structure of E. coli DnaC helicase loader]]
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019013274</ref><references group="xtra"/>
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Berger, J.]]
+
[[Category: Large Structures]]
-
[[Category: Coons, M M.]]
+
[[Category: Berger J]]
-
[[Category: Erzberger, J P.]]
+
[[Category: Coons MM]]
-
[[Category: Mott, M L.]]
+
[[Category: Erzberger JP]]
-
[[Category: Atp-binding]]
+
[[Category: Mott ML]]
-
[[Category: Helicase loader]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Replication]]
+
-
[[Category: Replication initiation factor]]
+

Current revision

Crystal structure of the DnaC helicase loader in complex with ADP-BeF3

PDB ID 3ecc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools