This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c3l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:32, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c3l.png|left|200px]]
 
-
{{STRUCTURE_3c3l| PDB=3c3l | SCENE= }}
+
==X-ray crystal structure of the N4 mini-vRNAP P2 promoter complex==
-
 
+
<StructureSection load='3c3l' size='340' side='right'caption='[[3c3l]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===X-ray crystal structure of the N4 mini-vRNAP P2 promoter complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3c3l]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_N4 Escherichia phage N4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C3L FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19061645}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3l OCA], [https://pdbe.org/3c3l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c3l RCSB], [https://www.ebi.ac.uk/pdbsum/3c3l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c3l ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3c3l]] is a 4 chain structure of [[RNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_phage_n4 Escherichia phage n4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3L OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/RPOLV_BPN4 RPOLV_BPN4] DNA-dependent RNA polymerase, which is injected into the host upon infection and transcribes the phage early genes from promoters that have a 5-bp stem-3 nt loop hairpin structure.<ref>PMID:18362338</ref> <ref>PMID:19061645</ref>
==See Also==
==See Also==
-
*[[RNA polymerase|RNA polymerase]]
+
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:019061645</ref><references group="xtra"/>
+
__TOC__
-
[[Category: DNA-directed RNA polymerase]]
+
</StructureSection>
-
[[Category: Escherichia phage n4]]
+
[[Category: Escherichia phage N4]]
-
[[Category: Gleghorn, M L.]]
+
[[Category: Large Structures]]
-
[[Category: Murakami, K S.]]
+
[[Category: Gleghorn ML]]
-
[[Category: Dna-hairpin]]
+
[[Category: Murakami KS]]
-
[[Category: Nucleotidyltransferase]]
+
-
[[Category: Promoter binary complex]]
+
-
[[Category: Protein-dna complex]]
+
-
[[Category: Transferase-dna complex]]
+
-
[[Category: Virion rna polymerase]]
+

Current revision

X-ray crystal structure of the N4 mini-vRNAP P2 promoter complex

PDB ID 3c3l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools