1j9m
From Proteopedia
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| - | [[Image:1j9m.png|left|200px]] | ||
| - | + | ==K38H mutant of Streptomyces K15 DD-transpeptidase== | |
| - | + | <StructureSection load='1j9m' size='340' side='right'caption='[[1j9m]], [[Resolution|resolution]] 1.65Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1j9m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp._K15 Streptomyces sp. K15]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1eqs 1eqs]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J9M FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j9m OCA], [https://pdbe.org/1j9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j9m RCSB], [https://www.ebi.ac.uk/pdbsum/1j9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j9m ProSAT]</span></td></tr> |
| - | [[1j9m]] is a 1 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/DACX_STRSK DACX_STRSK] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j9/1j9m_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j9m ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Penicillin-binding protein|Penicillin-binding protein]] | + | *[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]] |
| - | + | *[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Streptomyces sp.]] | + | [[Category: Streptomyces sp. K15]] |
| - | [[Category: Charlier | + | [[Category: Charlier P]] |
| - | [[Category: Fonze | + | [[Category: Fonze E]] |
| - | [[Category: Nguyen-Disteche | + | [[Category: Nguyen-Disteche M]] |
| - | [[Category: Rhazi | + | [[Category: Rhazi N]] |
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Current revision
K38H mutant of Streptomyces K15 DD-transpeptidase
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