2xik

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2xik" [edit=sysop:move=sysop])
Current revision (09:36, 6 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2xik.png|left|200px]]
 
-
{{STRUCTURE_2xik| PDB=2xik | SCENE= }}
+
==Structure of Human YSK1 (Yeast Sps1-Ste20-related Kinase 1)==
-
 
+
<StructureSection load='2xik' size='340' side='right'caption='[[2xik]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
-
===STRUCTURE OF HUMAN YSK1 (YEAST SPS1-STE20-RELATED KINASE 1)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2xik]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XIK FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=J60:5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE'>J60</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
-
[[2xik]] is a 1 chain structure of [[Serine/threonine protein kinase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIK OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xik OCA], [https://pdbe.org/2xik PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xik RCSB], [https://www.ebi.ac.uk/pdbsum/2xik PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xik ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/STK25_HUMAN STK25_HUMAN] Oxidant stress-activated serine/threonine kinase that may play a role in the response to environmental stress. Targets to the Golgi apparatus where it appears to regulate protein transport events, cell adhesion, and polarity complexes important for cell migration.<ref>PMID:15037601</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/2xik_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xik ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Serine/threonine protein kinase|Serine/threonine protein kinase]]
+
*[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Non-specific serine/threonine protein kinase]]
+
[[Category: Large Structures]]
-
[[Category: Allerston, C.]]
+
[[Category: Allerston C]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Berridge, G.]]
+
[[Category: Berridge G]]
-
[[Category: Bountra, C.]]
+
[[Category: Bountra C]]
-
[[Category: Brenner, B.]]
+
[[Category: Brenner B]]
-
[[Category: Chaikuad, A.]]
+
[[Category: Chaikuad A]]
-
[[Category: Daga, N.]]
+
[[Category: Daga N]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Elkins, J M.]]
+
[[Category: Elkins JM]]
-
[[Category: Gileadi, O.]]
+
[[Category: Gileadi O]]
-
[[Category: Knapp, S.]]
+
[[Category: Knapp S]]
-
[[Category: Mahajan, P.]]
+
[[Category: Mahajan P]]
-
[[Category: Muniz, J R.C.]]
+
[[Category: Muniz JRC]]
-
[[Category: Rellos, P.]]
+
[[Category: Rellos P]]
-
[[Category: Savitsky, P.]]
+
[[Category: Savitsky P]]
-
[[Category: Shrestha, B.]]
+
[[Category: Shrestha B]]
-
[[Category: Ugochukwu, E.]]
+
[[Category: Ugochukwu E]]
-
[[Category: Vollmar, M.]]
+
[[Category: Vollmar M]]
-
[[Category: Vondelft, F.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Von Delft F]]
-
[[Category: Kinase1]]
+
-
[[Category: Transferase]]
+
-
[[Category: Ysk1]]
+

Current revision

Structure of Human YSK1 (Yeast Sps1-Ste20-related Kinase 1)

PDB ID 2xik

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools