2eq8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 23 October 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2eq8.png|left|200px]]
 
-
{{STRUCTURE_2eq8| PDB=2eq8 | SCENE= }}
+
==Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp==
-
 
+
<StructureSection load='2eq8' size='340' side='right'caption='[[2eq8]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
-
===Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2eq8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQ8 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
[[2eq8]] is a 6 chain structure of [[Dihydrolipoamide acetyltransferase]], [[Dihydrolipoamide dehydrogenase]] and [[Pyruvate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ8 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eq8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq8 OCA], [https://pdbe.org/2eq8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eq8 RCSB], [https://www.ebi.ac.uk/pdbsum/2eq8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eq8 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SLR0_THET8 Q5SLR0_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eq8 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Dihydrolipoamide acetyltransferase|Dihydrolipoamide acetyltransferase]]
+
*[[Dihydrolipoamide acetyltransferase 3D structures|Dihydrolipoamide acetyltransferase 3D structures]]
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
-
*[[Pyruvate dehydrogenase|Pyruvate dehydrogenase]]
+
__TOC__
-
[[Category: Dihydrolipoyl dehydrogenase]]
+
</StructureSection>
-
[[Category: Thermus thermophilus]]
+
[[Category: Large Structures]]
-
[[Category: Kamiya, N.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Nakai, T.]]
+
[[Category: Kamiya N]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Nakai T]]
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein-protein complex]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp

PDB ID 2eq8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools