3rgf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:22, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3rgf.png|left|200px]]
 
-
{{STRUCTURE_3rgf| PDB=3rgf | SCENE= }}
+
==Crystal Structure of human CDK8/CycC==
-
 
+
<StructureSection load='3rgf' size='340' side='right'caption='[[3rgf]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===Crystal Structure of human CDK8/CycC===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3rgf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RGF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RGF FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21806996}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BAX:4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE'>BAX</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rgf OCA], [https://pdbe.org/3rgf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rgf RCSB], [https://www.ebi.ac.uk/pdbsum/3rgf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rgf ProSAT]</span></td></tr>
-
[[3rgf]] is a 2 chain structure of [[Cyclin-dependent kinase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RGF OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDK8_HUMAN CDK8_HUMAN] Component of the Mediator complex, a coactivator involved in regulated gene transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Phosphorylates the CTD (C-terminal domain) of the large subunit of RNA polymerase II (RNAp II), which may inhibit the formation of a transcription initiation complex. Phosphorylates CCNH leading to down-regulation of the TFIIH complex and transcriptional repression. Recruited through interaction with MAML1 to hyperphosphorylate the intracellular domain of NOTCH, leading to its degradation.<ref>PMID:10993082</ref> <ref>PMID:15546612</ref>
==See Also==
==See Also==
-
*[[Cyclin-dependent kinase|Cyclin-dependent kinase]]
+
*[[Cyclin 3D structures|Cyclin 3D structures]]
-
 
+
*[[Cyclin-dependent kinase 3D structures|Cyclin-dependent kinase 3D structures]]
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:021806996</ref><references group="xtra"/>
+
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Blaesse, M.]]
+
[[Category: Large Structures]]
-
[[Category: Boettcher, J.]]
+
[[Category: Blaesse M]]
-
[[Category: Huber, R.]]
+
[[Category: Boettcher J]]
-
[[Category: Maskos, K.]]
+
[[Category: Huber R]]
-
[[Category: Schneider, E V.]]
+
[[Category: Maskos K]]
-
[[Category: Protein kinase complex]]
+
[[Category: Schneider EV]]
-
[[Category: Transcription]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of human CDK8/CycC

PDB ID 3rgf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools