This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ii9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:35, 7 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ii9.png|left|200px]]
 
-
{{STRUCTURE_1ii9| PDB=1ii9 | SCENE= }}
+
==CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH AMP-PNP==
-
 
+
<StructureSection load='1ii9' size='340' side='right'caption='[[1ii9]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH AMP-PNP===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1ii9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1II9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1II9 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11395509}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TAS:TRIHYDROXYARSENITE(III)'>TAS</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ii9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ii9 OCA], [https://pdbe.org/1ii9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ii9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ii9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ii9 ProSAT]</span></td></tr>
-
[[1ii9]] is a 2 chain structure of [[ATPase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1II9 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ARSA1_ECOLX ARSA1_ECOLX] Anion-transporting ATPase. Catalyzes the extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ii/1ii9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ii9 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[ATPase|ATPase]]
+
*[[ATPase 3D structures|ATPase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:011395509</ref><references group="xtra"/>
+
-
[[Category: Arsenite-transporting ATPase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Gatti, D L.]]
+
[[Category: Large Structures]]
-
[[Category: Radaev, S.]]
+
[[Category: Gatti DL]]
-
[[Category: Rosen, B P.]]
+
[[Category: Radaev S]]
-
[[Category: Zhou, T.]]
+
[[Category: Rosen BP]]
-
[[Category: Amp-pnp]]
+
[[Category: Zhou T]]
-
[[Category: Arsa atpase]]
+
-
[[Category: Atp binding site]]
+
-
[[Category: Hydrolase]]
+

Current revision

CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH AMP-PNP

PDB ID 1ii9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools