1kwf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:28, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1kwf.png|left|200px]]
 
-
{{STRUCTURE_1kwf| PDB=1kwf | SCENE= }}
+
==Atomic Resolution Structure of an Inverting Glycosidase in Complex with Substrate==
-
 
+
<StructureSection load='1kwf' size='340' side='right'caption='[[1kwf]], [[Resolution|resolution]] 0.94&Aring;' scene=''>
-
===Atomic Resolution Structure of an Inverting Glycosidase in Complex with Substrate===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1kwf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KWF FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11884144}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.94&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=PRD_900016:beta-cellopentaose'>PRD_900016</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kwf OCA], [https://pdbe.org/1kwf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kwf RCSB], [https://www.ebi.ac.uk/pdbsum/1kwf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kwf ProSAT]</span></td></tr>
-
[[1kwf]] is a 1 chain structure of [[Glucanase]] with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KWF OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GUNA_ACET2 GUNA_ACET2] This enzyme catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/1kwf_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kwf ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Glucanase|Glucanase]]
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:011884144</ref><ref group="xtra">PMID:018754631</ref><references group="xtra"/>
+
[[Category: Acetivibrio thermocellus]]
-
[[Category: Cellulase]]
+
[[Category: Large Structures]]
-
[[Category: Clostridium thermocellum]]
+
[[Category: Alzari PM]]
-
[[Category: Alzari, P M.]]
+
[[Category: Beguin P]]
-
[[Category: Beguin, P.]]
+
[[Category: Costabel M]]
-
[[Category: Costabel, M.]]
+
[[Category: Guerin DMA]]
-
[[Category: Guerin, D M.A.]]
+
[[Category: Lamzin V]]
-
[[Category: Lamzin, V.]]
+
[[Category: Lascombe M-B]]
-
[[Category: Lascombe, M B.]]
+
[[Category: Souchon H]]
-
[[Category: Souchon, H.]]
+
-
[[Category: Atomic resolution]]
+
-
[[Category: Cellulase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Inverting glycosidase]]
+
-
[[Category: Protein-carbohydrate interaction]]
+
-
[[Category: Reaction mechanism]]
+

Current revision

Atomic Resolution Structure of an Inverting Glycosidase in Complex with Substrate

PDB ID 1kwf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools