This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gin

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1gin" [edit=sysop:move=sysop])
Current revision (07:25, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gin.png|left|200px]]
 
-
{{STRUCTURE_1gin| PDB=1gin | SCENE= }}
+
==CRYSTAL STRUCTURE OF ADENYLOSUCCINATE SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH GDP, IMP, HADACIDIN, NO3-, AND MG2+. DATA COLLECTED AT 298K (PH 6.5).==
-
 
+
<StructureSection load='1gin' size='340' side='right'caption='[[1gin]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF ADENYLOSUCCINATE SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH GDP, IMP, HADACIDIN, NO3-, AND MG2+. DATA COLLECTED AT 298K (PH 6.5).===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1gin]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GIN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GIN FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_9000627}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=HDA:HADACIDIN'>HDA</scene>, <scene name='pdbligand=IMP:INOSINIC+ACID'>IMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gin FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gin OCA], [https://pdbe.org/1gin PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gin RCSB], [https://www.ebi.ac.uk/pdbsum/1gin PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gin ProSAT]</span></td></tr>
-
[[1gin]] is a 1 chain structure of [[Adenylosuccinate Synthetase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GIN OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PURA_ECOLI PURA_ECOLI] Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity).[HAMAP-Rule:MF_00011]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gi/1gin_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gin ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Adenylosuccinate Synthetase|Adenylosuccinate Synthetase]]
+
*[[Adenylosuccinate synthetase 3D structures|Adenylosuccinate synthetase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:009000627</ref><references group="xtra"/>
+
-
[[Category: Adenylosuccinate synthase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Fromm, H J.]]
+
[[Category: Large Structures]]
-
[[Category: Honzatko, R B.]]
+
[[Category: Fromm HJ]]
-
[[Category: Poland, B W.]]
+
[[Category: Honzatko RB]]
-
[[Category: Gtp-hydrolyzing enzyme]]
+
[[Category: Poland BW]]
-
[[Category: Ligase]]
+
-
[[Category: Purine nucleotide biosynthesis]]
+

Current revision

CRYSTAL STRUCTURE OF ADENYLOSUCCINATE SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH GDP, IMP, HADACIDIN, NO3-, AND MG2+. DATA COLLECTED AT 298K (PH 6.5).

PDB ID 1gin

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools