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2gbz
From Proteopedia
(Difference between revisions)
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| - | [[Image:2gbz.png|left|200px]] | ||
| - | + | ==The Crystal Structure of XC847 from Xanthomonas campestris: a 3-5 Oligoribonuclease of DnaQ fold family with a Novel Opposingly-Shifted Helix== | |
| - | + | <StructureSection load='2gbz' size='340' side='right'caption='[[2gbz]], [[Resolution|resolution]] 2.30Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2gbz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xance Xance]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GBZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gbz OCA], [https://pdbe.org/2gbz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gbz RCSB], [https://www.ebi.ac.uk/pdbsum/2gbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gbz ProSAT]</span></td></tr> |
| - | [[2gbz]] is a 1 chain structure | + | </table> |
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/ORN_XANCP ORN_XANCP]] 3'-to-5' exoribonuclease specific for small oligoribonucleotides (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/2gbz_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gbz ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Ribonuclease|Ribonuclease]] | + | *[[Ribonuclease 3D structures|Ribonuclease 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| - | [[Category: | + | [[Category: Xance]] |
| - | [[Category: Chin, K H | + | [[Category: Chin, K H]] |
| - | [[Category: Chou, C C | + | [[Category: Chou, C C]] |
| - | [[Category: Chou, S H | + | [[Category: Chou, S H]] |
| - | [[Category: Wang, A H.J | + | [[Category: Wang, A H.J]] |
| - | [[Category: Yang, C Y | + | [[Category: Yang, C Y]] |
[[Category: 3'-5' oligoribonuclease]] | [[Category: 3'-5' oligoribonuclease]] | ||
[[Category: Deddh]] | [[Category: Deddh]] | ||
Current revision
The Crystal Structure of XC847 from Xanthomonas campestris: a 3-5 Oligoribonuclease of DnaQ fold family with a Novel Opposingly-Shifted Helix
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