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1oxe

From Proteopedia

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[[Image:1oxe.png|left|200px]]
 
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{{STRUCTURE_1oxe| PDB=1oxe | SCENE= }}
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==Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins==
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<StructureSection load='1oxe' size='340' side='right'caption='[[1oxe]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
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===Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1oxe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cfp_marker_plasmid_pWM1009 Cfp marker plasmid pWM1009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OXE FirstGlance]. <br>
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{{ABSTRACT_PUBMED_12729742}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oxe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oxe OCA], [https://pdbe.org/1oxe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oxe RCSB], [https://www.ebi.ac.uk/pdbsum/1oxe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oxe ProSAT]</span></td></tr>
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[[1oxe]] is a 1 chain structure of [[Alyssa Marsico/Sandbox 1]], [[Devon McCarthy/Sandbox 1]], [[Green Fluorescent Protein]], [[Sandbox104]] and [[User:Joanne Lau/Sandbox 5]] with sequence from [http://en.wikipedia.org/wiki/Cfp_marker_plasmid_pwm1009 Cfp marker plasmid pwm1009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OXE OCA].
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ox/1oxe_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oxe ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Alyssa Marsico/Sandbox 1|Alyssa Marsico/Sandbox 1]]
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*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
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*[[Devon McCarthy/Sandbox 1|Devon McCarthy/Sandbox 1]]
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__TOC__
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*[[Green Fluorescent Protein|Green Fluorescent Protein]]
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</StructureSection>
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*[[Sandbox104|Sandbox104]]
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[[Category: Cfp marker plasmid pWM1009]]
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*[[User:Joanne Lau/Sandbox 5|User:Joanne Lau/Sandbox 5]]
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[[Category: Large Structures]]
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[[Category: Azim MK]]
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==Reference==
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[[Category: Budisa N]]
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<ref group="xtra">PMID:012729742</ref><ref group="xtra">PMID:012729750</ref><references group="xtra"/>
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[[Category: Holak TA]]
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[[Category: Cfp marker plasmid pwm1009]]
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[[Category: Huber R]]
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[[Category: Azim, M K.]]
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[[Category: Hyun Bae J]]
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[[Category: Bae, J Hyun.]]
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[[Category: Jung G]]
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[[Category: Budisa, N.]]
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[[Category: Kim JS]]
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[[Category: Holak, T A.]]
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[[Category: Moroder L]]
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[[Category: Huber, R.]]
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[[Category: Rubini M]]
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[[Category: Jung, G.]]
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[[Category: Seifert MH]]
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[[Category: Kim, J S.]]
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[[Category: Wiegand G]]
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[[Category: Moroder, L.]]
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[[Category: Zumbusch A]]
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[[Category: Rubini, M.]]
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[[Category: Seifert, M H.]]
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[[Category: Wiegand, G.]]
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[[Category: Zumbusch, A.]]
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[[Category: Amino acid incorporation]]
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[[Category: Chromophore]]
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[[Category: Genetic code]]
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[[Category: Green fluorescent protein]]
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[[Category: Luminescent protein]]
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[[Category: Tryptophan]]
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Current revision

Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins

PDB ID 1oxe

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