This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3s8f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:48, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3s8f.png|left|200px]]
 
-
{{STRUCTURE_3s8f| PDB=3s8f | SCENE= }}
+
==1.8 A structure of ba3 cytochrome c oxidase from Thermus thermophilus in lipid environment==
-
 
+
<StructureSection load='3s8f' size='340' side='right'caption='[[3s8f]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===1.8 A structure of ba3 cytochrome c oxidase from Thermus thermophilus in lipid environment===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3s8f]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S8F FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21814577}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CUA:DINUCLEAR+COPPER+ION'>CUA</scene>, <scene name='pdbligand=HAS:HEME-AS'>HAS</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s8f OCA], [https://pdbe.org/3s8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s8f RCSB], [https://www.ebi.ac.uk/pdbsum/3s8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s8f ProSAT]</span></td></tr>
-
[[3s8f]] is a 3 chain structure of [[Cytochrome c oxidase]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S8F OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/COX1_THET8 COX1_THET8]
==See Also==
==See Also==
-
*[[Cytochrome c oxidase|Cytochrome c oxidase]]
+
*[[Cytochrome c oxidase 3D structures|Cytochrome c oxidase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:021814577</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Cytochrome-c oxidase]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Thermus thermophilus]]
+
[[Category: Chen Y]]
-
[[Category: Chen, Y.]]
+
[[Category: Cherezov V]]
-
[[Category: Cherezov, V.]]
+
[[Category: Fee JA]]
-
[[Category: Fee, J A.]]
+
[[Category: Katritch V]]
-
[[Category: Katritch, V.]]
+
[[Category: Liu W]]
-
[[Category: Liu, W.]]
+
[[Category: Stout CD]]
-
[[Category: Stout, C D.]]
+
[[Category: Tiefenbrunn T]]
-
[[Category: Tiefenbrunn, T.]]
+
-
[[Category: Complex iv]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Lipid cubic phase]]
+
-
[[Category: Membrane]]
+
-
[[Category: Monoolein]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxide]]
+
-
[[Category: Proton pump]]
+
-
[[Category: Respiratory chain]]
+

Current revision

1.8 A structure of ba3 cytochrome c oxidase from Thermus thermophilus in lipid environment

PDB ID 3s8f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools