This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2a21
From Proteopedia
(Difference between revisions)
m (Protected "2a21" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2a21.png|left|200px]] | ||
| - | + | ==Aquifex aeolicus KDO8PS in complex with PEP, PO4, and Zn2+== | |
| - | + | <StructureSection load='2a21' size='340' side='right'caption='[[2a21]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2a21]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A21 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A21 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEP:PHOSPHOENOLPYRUVATE'>PEP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a21 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a21 OCA], [https://pdbe.org/2a21 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a21 RCSB], [https://www.ebi.ac.uk/pdbsum/2a21 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a21 ProSAT]</span></td></tr> |
| - | [[2a21]] is a 2 chain structure | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/KDSA_AQUAE KDSA_AQUAE] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a2/2a21_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a21 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Kdo-8-phosphate synthase|Kdo-8-phosphate synthase]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
| - | + | ||
[[Category: Aquifex aeolicus]] | [[Category: Aquifex aeolicus]] | ||
| - | [[Category: Gatti | + | [[Category: Large Structures]] |
| - | [[Category: Kona | + | [[Category: Gatti DL]] |
| - | [[Category: Lu | + | [[Category: Kona F]] |
| - | [[Category: Martin | + | [[Category: Lu J]] |
| - | [[Category: Xu | + | [[Category: Martin P]] |
| - | + | [[Category: Xu X]] | |
Current revision
Aquifex aeolicus KDO8PS in complex with PEP, PO4, and Zn2+
| |||||||||||
Categories: Aquifex aeolicus | Large Structures | Gatti DL | Kona F | Lu J | Martin P | Xu X
